RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LMLNQ96KR4 655 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 SMAD5Q99717 465 aaKnown RBP3.21□□□□□ -1.9
TOP2A-202ENST00000577541 C1orf43Q9BWL3 253 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 GJB4Q9NTQ9 266 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 LMBRD1Q9NUN5 540 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 ABCF2Q9UG63 623 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 ANKRD6Q9Y2G4 727 aa3.21□□□□□ -1.9
TOP2A-202ENST00000577541 NOTCH2Q04721 2471 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 LACTBL1A8MY62 500 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 RFPL1O75677 317 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 CGAP01215 116 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 PIM1P11309 404 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 HOXA4Q00056 320 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 TEDDM1Q5T9Z0 273 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 FAM160B1Q5W0V3 765 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 SFRP4Q6FHJ7 346 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 ZNF549Q6P9A3 640 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 USP37Q86T82 979 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 DTX2Q86UW9 622 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 WFIKKN2Q8TEU8 576 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 STAG1Q8WVM7 1258 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 CUL5Q93034 780 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 C1GALT1C1Q96EU7 318 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 CDK5RAP3Q96JB5 506 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 FAM84BQ96KN1 310 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 AIFM3Q96NN9 605 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 RHOBTB2Q9BYZ6 727 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 SMOC2Q9H3U7 446 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 MRPS18AQ9NVS2 196 aaKnown RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 PNPOQ9NVS9 261 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 HESX1Q9UBX0 185 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 SCAF8Q9UPN6 1271 aaKnown RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 MED16Q9Y2X0 877 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 LUC7L2Q9Y383 392 aaKnown RBP3.2□□□□□ -1.9
TOP2A-202ENST00000577541 PCDHA3Q9Y5H8 950 aa3.2□□□□□ -1.9
TOP2A-202ENST00000577541 A0A087WYN8 130 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 B4DGG1 531 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 H3BML4 177 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 QSOX1O00391 747 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 TNFRSF13BO14836 293 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 IL33O95760 270 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 GNAI2P04899 355 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 ITGALP20701 1170 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 IBSPP21815 317 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 PPIFP30405 207 aaKnown RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 VIPR2P41587 438 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 GCLCP48506 637 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 PSMC1P62191 440 aaKnown RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 ZXDBP98169 803 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 PIN1Q13526 163 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 BOP1Q14137 746 aaKnown RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 PLS1Q14651 629 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 TBCCQ15814 346 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 ASIC2Q16515 512 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 RBM20Q5T481 1227 aaKnown RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 B3GNT9Q6UX72 402 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 CATIPQ7Z7H3 387 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 PIP4P1Q86T03 277 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 ZNF329Q86UD4 541 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 BRIX1Q8TDN6 353 aaKnown RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 DIS3LQ8TF46 1054 aaKnown RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 HOOK2Q96ED9 719 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 SLC35A4Q96G79 324 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 MACROD1Q9BQ69 325 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 DPH1Q9BZG8 443 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 TPSD1Q9BZJ3 242 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 FAM234AQ9H0X4 552 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 RGS17Q9UGC6 210 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-202ENST00000577541 SH2B3Q9UQQ2 575 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 STXBP5LQ9Y2K9 1186 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 PLEKHM1Q9Y4G2 1056 aa3.19□□□□□ -1.9
TOP2A-202ENST00000577541 A0A088AWK7 358 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 ANKRD62A6NC57 917 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 F5H697 171 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 H0YIZ8 118 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 GRID2O43424 1007 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 ALDH1L1O75891 902 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 TJP3O95049 919 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 NXPH3O95157 252 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 KIF20AO95235 890 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 PDGFRBP09619 1106 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 HOXD9P28356 352 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-202ENST00000577541 ARFIP2P53365 341 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 EEFSECP57772 596 aaKnown RBP3.18□□□□□ -1.9
TOP2A-202ENST00000577541 LOXL3P58215 753 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 ZNF618Q5T7W0 954 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 DAB2IPQ5VWQ8 1189 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 HIST2H2BCQ6DN03 193 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 PELI3Q8N2H9 469 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 ATRIPQ8WXE1 791 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 FAM136AQ96C01 138 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 RITA1Q96K30 269 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 MRGPRX1Q96LB2 322 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 MAP3K14Q99558 947 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 CDH19Q9H159 772 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 DDX56Q9NY93 547 aaKnown RBP3.18□□□□□ -1.9
TOP2A-202ENST00000577541 RAD54BQ9Y620 910 aa3.18□□□□□ -1.9
TOP2A-202ENST00000577541 DSCR3O14972 297 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms