RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 CNGA4Q8IV77 575 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 ABRAQ8N0Z2 381 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 DNAJC5GQ8N7S2 189 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 TERB1Q8NA31 727 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 DIS3LQ8TF46 1054 aaKnown RBP3.33□□□□□ -1.88
CDH8-204ENST00000577536 SNX18Q96RF0 628 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 CAMKK2Q96RR4 588 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 DPCDQ9BVM2 203 aaPredicted RBP3.33□□□□□ -1.88
CDH8-204ENST00000577536 SPRTNQ9H040 489 aaPredicted RBP3.33□□□□□ -1.88
CDH8-204ENST00000577536 VPS16Q9H269 839 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 ANLNQ9NQW6 1124 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 TRMT13Q9NUP7 481 aaKnown RBP3.33□□□□□ -1.88
CDH8-204ENST00000577536 ELOVL5Q9NYP7 299 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 WDR17Q8IZU2 1322 aa3.33□□□□□ -1.88
CDH8-204ENST00000577536 IKBKBO14920 756 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 AP1G1O43747 822 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 BCAR3O75815 825 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 VNN1O95497 513 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 CYP2A6P11509 494 aaPredicted RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 NCLP19338 710 aaKnown RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 CCT4P50991 539 aaKnown RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 ARFIP2P53365 341 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 E2F1Q01094 437 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 TRIP6Q15654 476 aaKnown RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 LY6KQ17RY6 165 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 RNASE12Q5GAN4 147 aaKnown RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 LMBRD2Q68DH5 695 aaPredicted RBP3.32□□□□□ -1.88
CDH8-204ENST00000577536 MIS18BP1Q6P0N0 1132 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 DPY19L3Q6ZPD9 716 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 DENND1CQ8IV53 801 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 IZUMO1Q8IYV9 350 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 SLC15A4Q8N697 577 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 KBTBD7Q8WVZ9 684 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 TRIM54Q9BYV2 358 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 CIPCQ9C0C6 399 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 SNX14Q9Y5W7 946 aa3.32□□□□□ -1.88
CDH8-204ENST00000577536 TCRBV5S1A1TA0A578 114 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 E5RJQ4 531 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 UBE2Q2LH0YL09 131 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 H3BML4 177 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 AP4M1O00189 453 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 UBXN7O94888 489 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 CT47B1P0C2W7 299 aaPredicted RBP3.31□□□□□ -1.88
CDH8-204ENST00000577536 MYCLP12524 364 aaPredicted RBP3.31□□□□□ -1.88
CDH8-204ENST00000577536 NPR1P16066 1061 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 FPR3P25089 353 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 HTR1BP28222 390 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 NR4A2P43354 598 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 ALDH5A1P51649 535 aaPredicted RBP3.31□□□□□ -1.88
CDH8-204ENST00000577536 CTBP1Q13363 440 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 LAMB3Q13751 1172 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 RABEP1Q15276 862 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 PLA1AQ53H76 456 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 PXDC1Q5TGL8 231 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 SERPINA13PQ6UXR4 307 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 ZNF783Q6ZMS7 281 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 DAAM2Q86T65 1068 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 KRT73Q86Y46 540 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 OR6B3Q8NGW1 331 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 TMEM171Q8WVE6 324 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 RSPRY1Q96DX4 576 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 HMCESQ96FZ2 354 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 PRR25Q96S07 402 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 TMEM79Q9BSE2 394 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 RHOBTB2Q9BYZ6 727 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 TFCP2L1Q9NZI6 479 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 KLHL13Q9P2N7 655 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 GABBR1Q9UBS5 961 aa3.31□□□□□ -1.88
CDH8-204ENST00000577536 PNMA8BQ9ULN7 279 aaPredicted RBP3.31□□□□□ -1.88
CDH8-204ENST00000577536 NOP58Q9Y2X3 529 aaKnown RBP3.31□□□□□ -1.88
CDH8-204ENST00000577536 BTN3A1O00481 513 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 ALDH1L1O75891 902 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 HSPA6P17066 643 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 IBSPP21815 317 aaPredicted RBP3.3□□□□□ -1.88
CDH8-204ENST00000577536 ATP5F1P24539 256 aaPredicted RBP3.3□□□□□ -1.88
CDH8-204ENST00000577536 IL1R2P27930 398 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 PLCD1P51178 756 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 PRKAG1P54619 331 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 PIN1Q13526 163 aaPredicted RBP3.3□□□□□ -1.88
CDH8-204ENST00000577536 Q4G0T1 1027 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 AWAT2Q6E213 333 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 ZNF813Q6ZN06 617 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
CDH8-204ENST00000577536 TECPR1Q7Z6L1 1165 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 SFTPA1Q8IWL2 248 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 PRSS3P2Q8NHM4 247 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 BPIFB1Q8TDL5 484 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 PIGOQ8TEQ8 1089 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 RAPGEF4Q8WZA2 1011 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 GPATCH3Q96I76 525 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 ZC3H10Q96K80 434 aaKnown RBP3.3□□□□□ -1.88
CDH8-204ENST00000577536 AIFM3Q96NN9 605 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 NT5C1BQ96P26 610 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 MMS19Q96T76 1030 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 FAM118BQ9BPY3 351 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 C17orf80Q9BSJ5 609 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 KRTAP1-5Q9BYS1 174 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 DPH1Q9BZG8 443 aa3.3□□□□□ -1.88
CDH8-204ENST00000577536 MS4A7Q9GZW8 240 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms