RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 WDFY3Q8IZQ1 3526 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 AKAP13Q12802 2813 aa12.87□□□□□ -0.35
PRPF8-215ENST00000576958 LEFTY2O00292 366 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 LRP3O75074 770 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 TOP3BO95985 862 aaKnown RBP12.86□□□□□ -0.35
PRPF8-215ENST00000576958 CYP17A1P05093 508 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 USP17L7P0C7H9 530 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 DLATP10515 647 aaKnown RBP12.86□□□□□ -0.35
PRPF8-215ENST00000576958 HDCP19113 662 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 GRIK1P39086 918 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 POU5F1Q01860 360 aaKnown RBP12.86□□□□□ -0.35
PRPF8-215ENST00000576958 ORC1Q13415 861 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 STPG1Q5TH74 334 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 TMEM92Q6UXU6 159 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 TRAPPC11Q7Z392 1133 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 CPA6Q8N4T0 437 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 CACTINQ8WUQ7 758 aaKnown RBP12.86□□□□□ -0.35
PRPF8-215ENST00000576958 RLN3Q8WXF3 142 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 MMS19Q96T76 1030 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 SDCBP2Q9H190 292 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
PRPF8-215ENST00000576958 MAGEC2Q9UBF1 373 aaPredicted RBP12.86□□□□□ -0.35
PRPF8-215ENST00000576958 TRIM24O15164 1050 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
PRPF8-215ENST00000576958 ABL1P00519 1130 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 ZNF806P0C7X5 589 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 SPINK2P20155 84 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 SDHBP21912 280 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 WARSP23381 471 aaKnown RBP12.85□□□□□ -0.35
PRPF8-215ENST00000576958 ABCD1P33897 745 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 TXLNAP40222 546 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 LHX1P48742 406 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
PRPF8-215ENST00000576958 CDH8P55286 799 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 MYL6P60660 151 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 KDSRQ06136 332 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 KCNB1Q14721 858 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 LINC00301Q8NCQ3 95 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 MDGA1Q8NFP4 955 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 USP33Q8TEY7 942 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 SCFD1Q8WVM8 642 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 ANKRD36BP1Q96IX9 119 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 B3GNT5Q9BYG0 378 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 SMYD3Q9H7B4 428 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 TMEM206Q9H813 350 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 FSCN3Q9NQT6 498 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 CPQQ9Y646 472 aa12.85□□□□□ -0.35
PRPF8-215ENST00000576958 NUP205Q92621 2012 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 THADAQ6YHU6 1953 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ZNF840PA6NDX5 716 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ZNF233A6NK53 670 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ZZEF1O43149 2961 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 TNNC2P02585 160 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 DRD1P21728 446 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 PCSK1P29120 753 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 MAGEA11P43364 429 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 DGKEP52429 567 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ASIC1P78348 528 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 CREB5Q02930 508 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 CYP24A1Q07973 514 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 TAF10Q12962 218 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 SNRNP35Q16560 246 aaKnown RBP12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ST3GAL2Q16842 350 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ANO7Q6IWH7 933 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 PAQR9Q6ZVX9 377 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 SYT13Q7L8C5 426 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 HS2ST1Q7LGA3 356 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 CCDC65Q8IXS2 484 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ALLCQ8N6M5 410 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
PRPF8-215ENST00000576958 OR6B3Q8NGW1 331 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ATP2A3Q93084 1043 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ZC3H10Q96K80 434 aaKnown RBP12.84□□□□□ -0.35
PRPF8-215ENST00000576958 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
PRPF8-215ENST00000576958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.358e-7■■■■■ 66.5
PRPF8-215ENST00000576958 KBTBD4Q9NVX7 518 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 CFAP97Q9P2B7 532 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 UXTQ9UBK9 157 aaPredicted RBP12.84□□□□□ -0.35
PRPF8-215ENST00000576958 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 HCN2Q9UL51 889 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 CDH9Q9ULB4 789 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 ATXN2Q99700 1313 aaKnown RBP12.84□□□□□ -0.35
PRPF8-215ENST00000576958 SPEGQ15772 3267 aa12.84□□□□□ -0.35
PRPF8-215ENST00000576958 SGK1O00141 431 aa12.83□□□□□ -0.36
PRPF8-215ENST00000576958 STX6O43752 255 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms