RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MSTNO14793 375 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 TMPRSS2O15393 492 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 SEC24AO95486 1093 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 PROCP04070 461 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 HNRNPA1P09651 372 aaKnown RBP eCLIP6.79□□□□□ -1.32
NUP88-212ENST00000576708 CD72P21854 359 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 PROZP22891 400 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 GUCY2FP51841 1108 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 ELAVL2Q12926 359 aaKnown RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 DMP1Q13316 513 aaPredicted RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 SNW1Q13573 536 aaKnown RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 PWP1Q13610 501 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 INPP5AQ14642 412 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 SLC5A9Q2M3M2 681 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 SLC10A6Q3KNW5 377 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 BNC2Q6ZN30 1099 aaPredicted RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 NT5DC4Q86YG4 428 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 ARMC10Q8N2F6 343 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 LRRC15Q8TF66 581 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 FAM46AQ96IP4 442 aaKnown RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 RTP3Q9BQQ7 232 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 CCDC94Q9BW85 323 aaPredicted RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 MRPL4Q9BYD3 311 aaKnown RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 RAB34Q9BZG1 259 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 PLA2G2FQ9BZM2 168 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 HAPLN2Q9GZV7 340 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 ARHGEF3Q9NR81 526 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 SLC2A4RGQ9NR83 387 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 DLGAP2Q9P1A6 1054 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 TUBGCP4Q9UGJ1 667 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 MTF2Q9Y483 593 aaPredicted RBP6.79□□□□□ -1.32
NUP88-212ENST00000576708 BACE2Q9Y5Z0 518 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 ACTL7BQ9Y614 415 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 R4GN57 208 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 DOCK8Q8NF50 2099 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 WDR27A2RRH5 827 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TBC1D4O60343 1298 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 IGHA1P01876 353 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 PLA2G4BP0C869 781 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 MCF2P10911 925 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 KCNE1P15382 129 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TCF3P15923 654 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 GJA1P17302 382 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 CEBPBP17676 345 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 GUCY2CP25092 1073 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 GJB2P29033 226 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 HOXA9P31269 272 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 PRPHP41219 470 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TNFSF9P41273 254 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 CDR1P51861 262 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 SLC12A3P55017 1021 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 RACK1P63244 317 aaKnown RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 ATP2C1P98194 919 aaPredicted RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 ROR1Q01973 937 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 ID3Q02535 119 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 LMNB2Q03252 620 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 GRIN1Q05586 938 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 DHX8Q14562 1220 aaKnown RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 PABPC1LQ4VXU2 614 aaKnown RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 SGO2Q562F6 1265 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 SNAP47Q5SQN1 464 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 ZBTB41Q5SVQ8 909 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 CDPF1Q6NVV7 123 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 PDXDC1Q6P996 788 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 LRFN4Q6PJG9 635 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 MPZL3Q6UWV2 235 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 ANKS3Q6ZW76 656 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 APBB1IPQ7Z5R6 666 aaPredicted RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 ADSSL1Q8N142 457 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 SYT2Q8N9I0 419 aaPredicted RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 GOLM1Q8NBJ4 401 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TMEM161BQ8NDZ6 487 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 NKD2Q969F2 451 aaPredicted RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 TCEAL4Q96EI5 215 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TMX3Q96JJ7 454 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 DRC1Q96MC2 740 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 UROC1Q96N76 676 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 CYP4F11Q9HBI6 524 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TOPORSQ9NS56 1045 aaPredicted RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 ANKFY1Q9P2R3 1169 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 ADAMTS1Q9UHI8 967 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 FBXL5Q9UKA1 691 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 MRPS23Q9Y3D9 190 aaKnown RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 SIT1Q9Y3P8 196 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 NUB1Q9Y5A7 615 aa6.78□□□□□ -1.32
NUP88-212ENST00000576708 TIMM13Q9Y5L4 95 aaPredicted RBP6.78□□□□□ -1.32
NUP88-212ENST00000576708 NOTCH4Q99466 2003 aa6.77□□□□□ -1.32
NUP88-212ENST00000576708 ZFHX2Q9C0A1 2572 aaPredicted RBP6.77□□□□□ -1.33
NUP88-212ENST00000576708 TRIP11Q15643 1979 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 H3BQV1 296 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 LAD1O00515 517 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 PRRG1O14668 218 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 PPEF2O14830 753 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 TRAPPC3O43617 180 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 ABLIM3O94929 683 aa6.77□□□□□ -1.33
NUP88-212ENST00000576708 VNN2O95498 520 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms