RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 TRAIPQ9BWF2 469 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 TJP2Q9UDY2 1190 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 GTF2IRD1Q9UHL9 959 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 HES2Q9Y543 173 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 MKI67P46013 3256 aaKnown RBP19.66■□□□□ 0.74
SPNS3-204ENST00000575194 LIASO43766 372 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 ADCY8P40145 1251 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 CDKN2BP42772 138 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 ZNF200P98182 395 aaPredicted RBP19.65■□□□□ 0.74
SPNS3-204ENST00000575194 KRT71Q3SY84 523 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 SV2CQ496J9 727 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 UBXN11Q5T124 520 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 KAZNQ674X7 775 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 KCTD16Q68DU8 428 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 GSTA5Q7RTV2 222 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 SLC43A3Q8NBI5 491 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 OR2W6PQ8NHA6 318 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 SCN1AP35498 2009 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 SMIM28A0A1B0GU29 152 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 PIRO00625 290 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 GPD1P21695 349 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 AKAP5P24588 427 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 PCK1P35558 622 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 ZNF143P52747 638 aaPredicted RBP19.65■□□□□ 0.74
SPNS3-204ENST00000575194 MRPS6P82932 125 aaKnown RBP19.65■□□□□ 0.74
SPNS3-204ENST00000575194 BYSLQ13895 437 aaKnown RBP19.65■□□□□ 0.74
SPNS3-204ENST00000575194 ATP13A4Q4VNC1 1196 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 GLRA4Q5JXX5 417 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 ARHGAP17Q68EM7 881 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 OR6B2Q6IFH4 312 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 HACE1Q8IYU2 909 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 TTC13Q8NBP0 860 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 NCAPGQ9BPX3 1015 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 CNPY3Q9BT09 278 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 FOXP3Q9BZS1 431 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 CENPHQ9H3R5 247 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 GDAP2Q9NXN4 497 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 ANAPC5Q9UJX4 755 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 DRG1Q9Y295 367 aaKnown RBP19.65■□□□□ 0.74
SPNS3-204ENST00000575194 NEU2Q9Y3R4 380 aa19.65■□□□□ 0.74
SPNS3-204ENST00000575194 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.65■□□□□ 0.74
SPNS3-204ENST00000575194 PPEF2O14830 753 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 IVLP07476 585 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 TAF6P49848 677 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 GDF6Q6KF10 455 aaPredicted RBP19.64■□□□□ 0.73
SPNS3-204ENST00000575194 ACOT1Q86TX2 421 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 ZDHHC17Q8IUH5 632 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 SH2D3CQ8N5H7 860 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 OR6B3Q8NGW1 331 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 STK32AQ8WU08 396 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 RAPGEF5Q92565 580 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 ZWILCHQ9H900 591 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 IPPQ9Y573 584 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 TRPV2Q9Y5S1 764 aa19.64■□□□□ 0.73
SPNS3-204ENST00000575194 E5RJQ4 531 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 KRT10P13645 584 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 KCTD19Q17RG1 926 aaPredicted RBP19.63■□□□□ 0.73
SPNS3-204ENST00000575194 PPP1R26Q5T8A7 1209 aaPredicted RBP19.63■□□□□ 0.73
SPNS3-204ENST00000575194 TWF2Q6IBS0 349 aaKnown RBP19.63■□□□□ 0.73
SPNS3-204ENST00000575194 RHBDF2Q6PJF5 856 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 FAM183BPQ6ZVS7 135 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 ANKS1BQ7Z6G8 1248 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 EMC1Q8N766 993 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 NKD2Q969F2 451 aaPredicted RBP19.63■□□□□ 0.73
SPNS3-204ENST00000575194 CXCL16Q9H2A7 254 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 SNX25Q9H3E2 840 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 STARD7Q9NQZ5 370 aa19.63■□□□□ 0.73
SPNS3-204ENST00000575194 A8MXQ7 604 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 KPNA7A9QM74 516 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 DPYSL4O14531 572 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 PFKMP08237 780 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 IVDP26440 423 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 ITGA8P53708 1063 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 VCPP55072 806 aaKnown RBP19.62■□□□□ 0.73
SPNS3-204ENST00000575194 ADCY2Q08462 1091 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 TAZQ16635 292 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 SOWAHAQ2M3V2 549 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 PKDCCQ504Y2 493 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 TXNRD3NBQ6F5E7 133 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 FAM228AQ86W67 206 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 TMEM109Q9BVC6 243 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 STMN4Q9H169 189 aaPredicted RBP19.62■□□□□ 0.73
SPNS3-204ENST00000575194 EPB41L4BQ9H329 900 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 CYLDQ9NQC7 956 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 CWC15Q9P013 229 aaKnown RBP19.62■□□□□ 0.73
SPNS3-204ENST00000575194 ZNF148Q9UQR1 794 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 C3orf70A6NLC5 250 aaPredicted RBP19.62■□□□□ 0.73
SPNS3-204ENST00000575194 RIPK2O43353 540 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 ITGAVP06756 1048 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 KDELR1P24390 212 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 CDK7P50613 346 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 CDR1P51861 262 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 BCAT1P54687 386 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 GNGT1P63211 74 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 FAM47CQ5HY64 1035 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 CCDC25Q86WR0 208 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 ALLCQ8N6M5 410 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 C12orf29Q8N999 325 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 ANKLE1Q8NAG6 615 aa19.62■□□□□ 0.73
SPNS3-204ENST00000575194 APPL2Q8NEU8 664 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms