RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ATP2A3Q93084 1043 aa16.25■□□□□ 0.19
CTNS-209ENST00000574776 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
CTNS-209ENST00000574776 CGRRF1Q99675 332 aa16.25■□□□□ 0.19
CTNS-209ENST00000574776 TRPM5Q9NZQ8 1165 aa16.25■□□□□ 0.19
CTNS-209ENST00000574776 CCDC163A0A0D9SF12 145 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 TACC1O75410 805 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 PTPN1P18031 435 aaKnown RBP16.24■□□□□ 0.19
CTNS-209ENST00000574776 ZXDBP98169 803 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 EHHADHQ08426 723 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 USP4Q13107 963 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 NR1H3Q13133 447 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 PSMD2Q13200 908 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 WDR72Q3MJ13 1102 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 DENND5BQ6ZUT9 1274 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 CACNA2D4Q7Z3S7 1137 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 KBTBD6Q86V97 674 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 CAMKK1Q8N5S9 505 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 RPLP0P6Q8NHW5 317 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 EZH1Q92800 747 aaPredicted RBP16.24■□□□□ 0.19
CTNS-209ENST00000574776 RNF38Q9H0F5 515 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 ARRDC1-AS1Q9H2J1 176 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 ARHGAP26Q9UNA1 814 aa16.24■□□□□ 0.19
CTNS-209ENST00000574776 F8VP50 259 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 SLC30A4O14863 429 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 ABL1P00519 1130 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 FAM163BP0C2L3 166 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 AFMP43652 599 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 MYL6P60660 151 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 SNRPFP62306 86 aaKnown RBP16.23■□□□□ 0.19
CTNS-209ENST00000574776 TNNC1P63316 161 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 TRPC3Q13507 836 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 CCDC6Q16204 474 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 FBXO43Q4G163 708 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 CEP295NLQ96MC4 621 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 GZF1Q9H116 711 aaPredicted RBP16.23■□□□□ 0.19
CTNS-209ENST00000574776 DPEP3Q9H4B8 488 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
CTNS-209ENST00000574776 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 SPAG17Q6Q759 2223 aa16.23■□□□□ 0.19
CTNS-209ENST00000574776 TPRP12270 2363 aaKnown RBP16.22■□□□□ 0.19
CTNS-209ENST00000574776 ZNF840PA6NDX5 716 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 LEFTY2O00292 366 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 TRIM66O15016 1216 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 PHACTR2O75167 634 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
CTNS-209ENST00000574776 TCF3P15923 654 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 RAP1GAPP47736 663 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 PDE6CP51160 858 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 CACNA2D1P54289 1103 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 CUL4BQ13620 913 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 SF3A2Q15428 464 aaKnown RBP16.22■□□□□ 0.19
CTNS-209ENST00000574776 SNX21Q969T3 373 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 LOXL4Q96JB6 756 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 C8orf48Q96LL4 319 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 TTLL2Q9BWV7 592 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 B3GNT5Q9BYG0 378 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 FAM13BQ9NYF5 915 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 EHD2Q9NZN4 543 aa16.22■□□□□ 0.19
CTNS-209ENST00000574776 UBE4BO95155 1302 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 PTPRDP23468 1912 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 PVALEFA0A1B0GWK0 134 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 A8MXQ7 604 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 CLDN5O00501 218 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 FOXD2O60548 495 aaPredicted RBP16.21■□□□□ 0.19
CTNS-209ENST00000574776 EXOC3O60645 756 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 NFATC1O95644 943 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 PFKLP17858 780 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 ME1P48163 572 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 PPP3CCP48454 512 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 CASP4P49662 377 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 NOP14P78316 857 aaKnown RBP16.21■□□□□ 0.19
CTNS-209ENST00000574776 IFRD2Q12894 506 aaPredicted RBP16.21■□□□□ 0.19
CTNS-209ENST00000574776 TAF10Q12962 218 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 DMC1Q14565 340 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.19
CTNS-209ENST00000574776 BMT2Q1RMZ1 405 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 TDRD10Q5VZ19 366 aaKnown RBP16.21■□□□□ 0.19
CTNS-209ENST00000574776 SYT13Q7L8C5 426 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 ADGRG2Q8IZP9 1017 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 ZNF518BQ9C0D4 1074 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 TMEM30AQ9NV96 361 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 SMPD4Q9NXE4 827 aa16.21■□□□□ 0.19
CTNS-209ENST00000574776 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.19
CTNS-209ENST00000574776 EML5Q05BV3 1969 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 ANTXRLA6NF34 631 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 SCAMP3O14828 347 aaKnown RBP16.2■□□□□ 0.18
CTNS-209ENST00000574776 EPN2O95208 641 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 STAU1O95793 577 aaKnown RBP16.2■□□□□ 0.18
CTNS-209ENST00000574776 F13A1P00488 732 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 ZNF806P0C7X5 589 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 ATICP31939 592 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 OPRD1P41143 372 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 CDH8P55286 799 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 SLC7A9P82251 487 aa16.2■□□□□ 0.18
CTNS-209ENST00000574776 AASDHQ4L235 1098 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms