RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 OSGEPQ9NPF4 335 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 PCDHB5Q9Y5E4 795 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 CHD9Q3L8U1 2897 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 WDR27A2RRH5 827 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 MTMR11A4FU01 709 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 C5orf67F2Z3F1 127 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 MOCS3O95396 460 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 VNN2O95498 520 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 CTSAP10619 480 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 BMP8BP34820 402 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 RGS19P49795 217 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 PTPN14Q15678 1187 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 CFAP221Q4G0U5 840 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 NUP85Q9BW27 656 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 CSNK1G1Q9HCP0 422 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 DMAP1Q9NPF5 467 aaPredicted RBP25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 CTTNBP2NLQ9P2B4 639 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 COG5Q9UP83 839 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 MYH10P35580 1976 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 DNAJB1P25685 340 aa25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 NOP2P46087 812 aaKnown RBP25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 GABRB2P47870 512 aa25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 NAP1L1P55209 391 aaKnown RBP25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 XYLT1Q86Y38 959 aa25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 FUBP3Q96I24 572 aaKnown RBP eCLIP25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 TGS1Q96RS0 853 aaKnown RBP25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 NKX2-4Q9H2Z4 354 aa25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 AVENQ9NQS1 362 aaPredicted RBP25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 STRIP2Q9ULQ0 834 aa25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 LZTS1Q9Y250 596 aa25.35■■□□□ 1.65
ATPAF1-213ENST00000574428 A0A0A6YYK5 440 aaPredicted RBP25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 GOLGA8SH3BPF8 625 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 GJB6O95452 261 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 LCP1P13796 627 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 ERVFC1P60507 584 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 NYAP1Q6ZVC0 841 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 TMC7Q7Z402 723 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 TMEM110Q86TL2 294 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 TDHQ8IZJ6 230 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 SPPL3Q8TCT6 385 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 POF1BQ8WVV4 589 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 TCF25Q9BQ70 676 aa25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 C11orf84Q9BUA3 381 aaPredicted RBP25.34■■□□□ 1.65
ATPAF1-213ENST00000574428 F8VP50 259 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 LILRB3O75022 631 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 GRIK1P39086 918 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 GPRIN1Q7Z2K8 1008 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 SCN4BQ8IWT1 228 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 RHOT2Q8IXI1 618 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 HSFY1Q96LI6 401 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 CRISPLD1Q9H336 500 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 CERS4Q9HA82 394 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 ENTPD7Q9NQZ7 604 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 SLC27A5Q9Y2P5 690 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 CAPN6Q9Y6Q1 641 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 HHLA1C9JL84 531 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 KIF5CO60282 957 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 RB1P06400 928 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 RPL34P49207 117 aaKnown RBP25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 ERVK-21P61565 698 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 ADCY1Q08828 1119 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 ADIGQ0VDE8 80 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 MAMLD1Q13495 774 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 PLEKHA7Q6IQ23 1121 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 DNAJC24Q6P3W2 148 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 FAM183BPQ6ZVS7 135 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 SCUBE3Q8IX30 993 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 MIS12Q9H081 205 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 ABCB6Q9NP58 842 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 MSRAQ9UJ68 235 aa25.33■■□□□ 1.65
ATPAF1-213ENST00000574428 CXCL14O95715 111 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 TNNT1P13805 278 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 SMARCB1Q12824 385 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 RAB30Q15771 203 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 OR6B2Q6IFH4 312 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 GPR65Q8IYL9 337 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 RNF10Q8N5U6 811 aaKnown RBP25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 ZNF564Q8TBZ8 553 aaPredicted RBP25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 SPPL2BQ8TCT7 592 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 KCTD13Q8WZ19 329 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 SAMD11Q96NU1 681 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 LRRC4Q9HBW1 653 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 CYLDQ9NQC7 956 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 PARVAQ9NVD7 372 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 PCDHGC5Q9Y5F6 944 aa25.32■■□□□ 1.64
ATPAF1-213ENST00000574428 CHD7Q9P2D1 2997 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 TCRBV5S1A1TA0A578 114 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 GRM6O15303 877 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 TEX28O15482 410 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 PAPSS1O43252 624 aaPredicted RBP25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 SOAT2O75908 522 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 ACADSBP45954 432 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 GPR15P49685 360 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 DUSP4Q13115 394 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 ZNF569Q5MCW4 686 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 PLPP4Q5VZY2 271 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 PPP2R2DQ66LE6 453 aa25.31■■□□□ 1.64
ATPAF1-213ENST00000574428 VSTM1Q6UX27 236 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms