RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 SLITRK1Q96PX8 696 aa17.56■□□□□ 0.4
TVP23B-207ENST00000574294 FAM83CQ9BQN1 747 aa17.56■□□□□ 0.4
TVP23B-207ENST00000574294 PRR23AA6NEV1 266 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 F8VP50 259 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 CETN3O15182 167 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 RTN3O95197 1032 aaPredicted RBP17.55■□□□□ 0.4
TVP23B-207ENST00000574294 CKMP06732 381 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 TCF3P15923 654 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 CTHP32929 405 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 PPP1R2P41236 205 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 PIK3CAP42336 1068 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 NRLP54845 237 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 PNOCQ13519 176 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 CCDC142Q17RM4 750 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 SPATA20Q8TB22 786 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 SMARCE1Q969G3 411 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 TSG101Q99816 390 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 FAM124BQ9H5Z6 455 aaPredicted RBP17.55■□□□□ 0.4
TVP23B-207ENST00000574294 SMYD3Q9H7B4 428 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 LMAN1LQ9HAT1 526 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 CYP3A43Q9HB55 503 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 GKN1Q9NS71 199 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 COMMD8Q9NX08 183 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 CIZ1Q9ULV3 898 aaPredicted RBP17.55■□□□□ 0.4
TVP23B-207ENST00000574294 PCDHGA2Q9Y5H1 932 aa17.55■□□□□ 0.4
TVP23B-207ENST00000574294 TADA3O75528 432 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 HLA-DRAP01903 254 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 EPB41P11171 864 aaKnown RBP17.54■□□□□ 0.4
TVP23B-207ENST00000574294 HDCP19113 662 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 CCR3P51677 355 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 STIM1Q13586 685 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 RUNX3Q13761 415 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 KRT39Q6A163 491 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 GPIHBP1Q8IV16 184 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 CRYBG2Q8N1P7 616 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 PDZD8Q8NEN9 1154 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 OVCA2Q8WZ82 227 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 SMARCD1Q96GM5 515 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 B3GNT5Q9BYG0 378 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 DPEP3Q9H4B8 488 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 TMEM8AQ9HCN3 771 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 TRPC7Q9HCX4 862 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-207ENST00000574294 PRMT8Q9NR22 394 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-207ENST00000574294 GTSE1Q9NYZ3 720 aa17.54■□□□□ 0.4
TVP23B-207ENST00000574294 COL4A3Q01955 1670 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 LMNAP02545 664 aaKnown RBP17.53■□□□□ 0.4
TVP23B-207ENST00000574294 CHRNB1P11230 501 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 CDH8P55286 799 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 FKBP3Q00688 224 aaKnown RBP17.53■□□□□ 0.4
TVP23B-207ENST00000574294 LRRC63Q05C16 580 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 C1orf220Q5T0J3 134 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 MAML2Q8IZL2 1156 aaPredicted RBP17.53■□□□□ 0.4
TVP23B-207ENST00000574294 NUP93Q8N1F7 819 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 ZFYVE19Q96K21 471 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 MED10Q9BTT4 135 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 ZNF518BQ9C0D4 1074 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 SMG9Q9H0W8 520 aaKnown RBP17.53■□□□□ 0.4
TVP23B-207ENST00000574294 GCNT4Q9P109 453 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 ARHGAP26Q9UNA1 814 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 CCL26Q9Y258 94 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 NME7Q9Y5B8 376 aa17.53■□□□□ 0.4
TVP23B-207ENST00000574294 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
TVP23B-207ENST00000574294 KINO60870 393 aaKnown RBP17.52■□□□□ 0.4
TVP23B-207ENST00000574294 YWHAQP27348 245 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 PRCPP42785 496 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 GCLMP48507 274 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 CSTF1Q05048 431 aaKnown RBP17.52■□□□□ 0.4
TVP23B-207ENST00000574294 INCA1Q0VD86 236 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 MTAPQ13126 283 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 NR1H3Q13133 447 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 MTF1Q14872 753 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 ZNF77Q15935 545 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 SCARA5Q6ZMJ2 495 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 ASCL5Q7RTU5 278 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 FAM35AQ86V20 835 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 SPEM1Q8N4L4 309 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 CPA6Q8N4T0 437 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 OSCP1Q8WVF1 389 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 ATRIPQ8WXE1 791 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 ATP2A3Q93084 1043 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 NIF3L1Q9GZT8 377 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 ZSCAN32Q9NX65 697 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 PCDHA5Q9Y5H7 936 aa17.52■□□□□ 0.4
TVP23B-207ENST00000574294 HELZP42694 1942 aaKnown RBP17.52■□□□□ 0.4
TVP23B-207ENST00000574294 MYH10P35580 1976 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 GVINP1Q7Z2Y8 2422 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 ZNF840PA6NDX5 716 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 PSMA7O14818 248 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 ASPAP45381 313 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 RAP1GAPP47736 663 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 NDST1P52848 882 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 USP46P62068 366 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 PPP3CAQ08209 521 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 USP4Q13107 963 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 ACOT1Q86TX2 421 aa17.51■□□□□ 0.39
TVP23B-207ENST00000574294 DDX42Q86XP3 938 aaKnown RBP eCLIP17.51■□□□□ 0.39
TVP23B-207ENST00000574294 ARL14EPQ8N8R7 260 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms