RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 TUBB2AQ13885 445 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 IFI16Q16666 785 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 ERCC6LQ2NKX8 1250 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 XKR4Q5GH76 650 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 PLPP4Q5VZY2 271 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 KIAA1841Q6NSI8 718 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 SYCE2Q6PIF2 218 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 TRIM72Q6ZMU5 477 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 SLFN11Q7Z7L1 901 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 RBM23Q86U06 439 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 RHOT2Q8IXI1 618 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 COLGALT2Q8IYK4 626 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 MCOLN2Q8IZK6 566 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 SLC4A11Q8NBS3 891 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 C1orf131Q8NDD1 294 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 VN1R2Q8NFZ6 395 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 SLC22A17Q8WUG5 538 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 ZNF606Q8WXB4 792 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 ACSF2Q96CM8 615 aaPredicted RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 BTBD6Q96KE9 485 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 ZFP42Q96MM3 310 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 C11orf70Q9BRQ4 267 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 TUBB2BQ9BVA1 445 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 NUP85Q9BW27 656 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 PDCL3Q9H2J4 239 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 SFXN1Q9H9B4 322 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 CYP3A43Q9HB55 503 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 C11orf16Q9NQ32 467 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 CHST7Q9NS84 486 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 CTTNBP2NLQ9P2B4 639 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 CNOT8Q9UFF9 292 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 GTF3C4Q9UKN8 822 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 UBQLN1Q9UMX0 589 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 NME7Q9Y5B8 376 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 ZNF318Q5VUA4 2279 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 KIAA1671Q9BY89 1806 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 HIDE1A8MVS5 230 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 NRP1O14786 923 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 HCRTO43612 131 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 MTA2O94776 668 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 GJB6O95452 261 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 URODP06132 367 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 P4HA1P13674 534 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 KCNE1P15382 129 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 CD19P15391 556 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 TCP1P17987 556 aaKnown RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 CYP3A5P20815 502 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 RRM1P23921 792 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 SLC11A1P49279 550 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 NDST1P52848 882 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 HADHBP55084 474 aaKnown RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 ZXDAP98168 799 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 DSG1Q02413 1049 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 PTP4A2Q12974 167 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 USP41Q3LFD5 358 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 DENND1BQ6P3S1 775 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 MMS22LQ6ZRQ5 1243 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 TRIM67Q6ZTA4 783 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 OTOP3Q7RTS5 596 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 GPR149Q86SP6 731 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 DAAM2Q86T65 1068 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 NT5DC3Q86UY8 548 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 CEP112Q8N8E3 955 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 NOA1Q8NC60 698 aaKnown RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 ZNF564Q8TBZ8 553 aaPredicted RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 MS4A14Q96JA4 679 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 UROC1Q96N76 676 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 PPP1R10Q96QC0 940 aaKnown RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 MRPL45Q9BRJ2 306 aaKnown RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 HERC2P3Q9BVR0 1158 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 TRIM7Q9C029 511 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 EPC1Q9H2F5 836 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 ABCB6Q9NP58 842 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 ZDHHC7Q9NXF8 308 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 MAFFQ9ULX9 164 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 BARX2Q9UMQ3 279 aaPredicted RBP10.14□□□□□ -0.79
NDE1-208ENST00000573694 PLXNA4Q9HCM2 1894 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 TECTAO75443 2155 aa10.14□□□□□ -0.79
NDE1-208ENST00000573694 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 EFCAB8A8MWE9 144 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 TMEM189-UBE2V1I3L0A0 370 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 PIRO00625 290 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 PER2O15055 1255 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 SPTLC1O15269 473 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 TRAPPC3O43617 180 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 PAEPP09466 180 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 IGFBP6P24592 240 aaPredicted RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 HOXA9P31269 272 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 NSFP46459 744 aaKnown RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 GLUD2P49448 558 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 MYO1EQ12965 1108 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms