RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TAZQ16635 292 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 CDCA2Q69YH5 1023 aaPredicted RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 ZNF214Q9UL59 606 aaPredicted RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 TCRBV9S1A1TA0A576 114 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 INHBAP08476 426 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 DHRS4L1P0CG22 281 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 BGNP21810 368 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 ETV4P43268 484 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 BACE1P56817 501 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 YWHAEP62258 255 aaKnown RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 CDK16Q00536 496 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 CXCL9Q07325 125 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 FAAP100Q0VG06 881 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 PRKD1Q15139 912 aaPredicted RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 KBTBD12Q3ZCT8 623 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 CMPK2Q5EBM0 449 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 ZPBP2Q6X784 338 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 ARMC2Q8NEN0 867 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 MCUR1Q96AQ8 359 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 PRR11Q96HE9 360 aaPredicted RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 NIFKQ9BYG3 293 aaKnown RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 PSME4Q14997 1843 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 MCF2LO15068 1137 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 FAM189A1O60320 539 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 DNAJC6O75061 913 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 UPP2O95045 317 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 ATG7O95352 703 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 TGDSO95455 350 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 DLDP09622 509 aaKnown RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 PYGBP11216 843 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 PEX19P40855 299 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 GRIK3Q13003 919 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 ZNF699Q32M78 642 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 SYCP2LQ5T4T6 812 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 CHSY1Q86X52 802 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 NIM1KQ8IY84 436 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 SPATA18Q8TC71 538 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 HSPH1Q92598 858 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 APOPT1Q96IL0 206 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 CALN1Q9BXU9 219 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 APOC4-APOC2K7ER74 178 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 TOM1L1O75674 476 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 APOC2P02655 101 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 LINGO3P0C6S8 592 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 ACADSP16219 412 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 NEK3P51956 506 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 YWHAGP61981 247 aaKnown RBP eCLIP16.34■□□□□ 0.21
NUP88-207ENST00000573584 GRM1Q13255 1194 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 TMEM132BQ14DG7 1078 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 TAF5Q15542 800 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 NAIF1Q69YI7 327 aaPredicted RBP16.34■□□□□ 0.21
NUP88-207ENST00000573584 SCYL3Q8IZE3 742 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 SLC44A1Q8WWI5 657 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 NXF1Q9UBU9 619 aaKnown RBP16.34■□□□□ 0.21
NUP88-207ENST00000573584 BRWD3Q6RI45 1802 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 DPPA5A6NC42 116 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 C2orf71A6NGG8 1288 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 KBTBD13C9JR72 458 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 ITGBL1O95965 494 aaPredicted RBP16.34■□□□□ 0.21
NUP88-207ENST00000573584 ASPAP45381 313 aa16.34■□□□□ 0.21
NUP88-207ENST00000573584 KPNB1Q14974 876 aaKnown RBP16.34■□□□□ 0.21
NUP88-207ENST00000573584 METTL5Q9NRN9 209 aaKnown RBP16.34■□□□□ 0.21
NUP88-207ENST00000573584 NVLO15381 856 aaKnown RBP16.33■□□□□ 0.21
NUP88-207ENST00000573584 ESRRAP11474 423 aaPredicted RBP16.33■□□□□ 0.21
NUP88-207ENST00000573584 VHLP40337 213 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 OAZ1P54368 228 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 MRPS35P82673 323 aaKnown RBP16.33■□□□□ 0.21
NUP88-207ENST00000573584 SLC18A2Q05940 514 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 TNFAIP1Q13829 316 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 RCN1Q15293 331 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 ACSBG2Q5FVE4 666 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 CCDC62Q6P9F0 684 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 RINLQ6ZS11 566 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 CMASQ8NFW8 434 aaPredicted RBP16.33■□□□□ 0.21
NUP88-207ENST00000573584 PRPF31Q8WWY3 499 aaKnown RBP16.33■□□□□ 0.21
NUP88-207ENST00000573584 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.21
NUP88-207ENST00000573584 YIPF3Q9GZM5 350 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 ACAD9Q9H845 621 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 NMRK1Q9NWW6 199 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 TAS2R1Q9NYW7 299 aa16.33■□□□□ 0.21
NUP88-207ENST00000573584 MYL2P10916 166 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 MIPP30301 263 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 RFC5P40937 340 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 HIRAP54198 1017 aaPredicted RBP16.33■□□□□ 0.2
NUP88-207ENST00000573584 DARS2Q6PI48 645 aaKnown RBP16.33■□□□□ 0.2
NUP88-207ENST00000573584 EP400NLQ6ZTU2 488 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 SH2D5Q6ZV89 423 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 ZC3H18Q86VM9 953 aaKnown RBP16.33■□□□□ 0.2
NUP88-207ENST00000573584 CPXM1Q96SM3 734 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 LBHD1Q9BQE6 289 aaPredicted RBP16.33■□□□□ 0.2
NUP88-207ENST00000573584 LHX5Q9H2C1 402 aa16.33■□□□□ 0.2
NUP88-207ENST00000573584 MSCO60682 206 aa16.32■□□□□ 0.2
NUP88-207ENST00000573584 AVILO75366 819 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms