RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 BDNFP23560 247 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 FCARP24071 287 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 ANXA13P27216 316 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 GABRR2P28476 465 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 GRIK1P39086 918 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 DDR2Q16832 855 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 ZNF394Q53GI3 561 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 FAM78AQ5JUQ0 283 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 PHLDB3Q6NSJ2 640 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 TMEM270Q6UE05 265 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 GAREM2Q75VX8 874 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 LUZP1Q86V48 1076 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 ARHGEF19Q8IW93 802 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 FBXL6Q8N531 539 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 WHAMMQ8TF30 809 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 SMARCD2Q92925 531 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 SMARCD1Q96GM5 515 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 HEXIM2Q96MH2 286 aaKnown RBP14.36□□□□□ -0.11
RPAIN-213ENST00000573577 ZSWIM3Q96MP5 696 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 ASB16Q96NS5 453 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 GPR88Q9GZN0 384 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 SLITRK6Q9H5Y7 841 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 SLC2A4RGQ9NR83 387 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 FBXL21Q9UKT6 434 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 PCDHB4Q9Y5E5 795 aa14.36□□□□□ -0.11
RPAIN-213ENST00000573577 PDGFBP01127 241 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-213ENST00000573577 CFHP08603 1231 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 PAEPP09466 180 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 CSH1P0DML2 217 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 CSH2P0DML3 217 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ATP1A3P13637 1013 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 HMGA1P17096 107 aaKnown RBP14.35□□□□□ -0.11
RPAIN-213ENST00000573577 COL9A1P20849 921 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 CDC25CP30307 473 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 RAD23BP54727 409 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ZNF445P59923 1031 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 UBXN1Q04323 297 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ORC1Q13415 861 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 SDHAF4Q5VUM1 108 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 SCN4BQ8IWT1 228 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
RPAIN-213ENST00000573577 UBR7Q8N806 425 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 SLC4A11Q8NBS3 891 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ZSCAN18Q8TBC5 510 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ELSPBP1Q96BH3 223 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 CYFIP2Q96F07 1278 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 GCNAQ96QF7 691 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 TWNKQ96RR1 684 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 HNRNPABQ99729 332 aaKnown RBP14.35□□□□□ -0.11
RPAIN-213ENST00000573577 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 ATXN3LQ9H3M9 355 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 TRPV4Q9HBA0 871 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 IL21Q9HBE4 155 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 EHD2Q9NZN4 543 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 WNT16Q9UBV4 365 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 KIAA1257Q9ULG3 409 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 DAAM1Q9Y4D1 1078 aa14.35□□□□□ -0.11
RPAIN-213ENST00000573577 NOL4O94818 638 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SERPINC1P01008 464 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 KRT5P13647 590 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SLC8A3P57103 927 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SGO2Q562F6 1265 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 STXBP5Q5T5C0 1151 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 TANGO2Q6ICL3 276 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SIX5Q8N196 739 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 KAT5Q92993 513 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 TRMT2BQ96GJ1 504 aaKnown RBP14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SPATA17Q96L03 361 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 C8orf48Q96LL4 319 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 KREMEN1Q96MU8 473 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
RPAIN-213ENST00000573577 PLA2G2FQ9BZM2 168 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 ZNF518BQ9C0D4 1074 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 MFSD1Q9H3U5 465 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 ZFP14Q9HCL3 533 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 DMAP1Q9NPF5 467 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-213ENST00000573577 PLCB1Q9NQ66 1216 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 KRT82Q9NSB4 513 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 FAM49BQ9NUQ9 324 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 UXTQ9UBK9 157 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-213ENST00000573577 MAGED2Q9UNF1 606 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-213ENST00000573577 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
RPAIN-213ENST00000573577 SLC38A8A6NNN8 435 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 F8VP50 259 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 CLDN5O00501 218 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 AP1G2O75843 785 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 FAM200BP0CF97 657 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 VDRP11473 427 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 CCDC130P13994 396 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 CD19P15391 556 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 ACO1P21399 889 aaKnown RBP14.33□□□□□ -0.12
RPAIN-213ENST00000573577 GPC5P78333 572 aa14.33□□□□□ -0.12
RPAIN-213ENST00000573577 CYP4F8P98187 520 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms