RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 HPSEQ9Y251 543 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 YIPF1Q9Y548 306 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 ASB3Q9Y575 518 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 UBE4BO95155 1302 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 ANK1P16157 1881 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 DOCK8Q8NF50 2099 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 FAM237AA0A1B0GTK4 181 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 ANKRD33BA6NCL7 494 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 PI15O43692 258 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 KLRC4O43908 158 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 PRPF40AO75400 957 aaKnown RBP7.98□□□□□ -1.13
NUP88-205ENST00000572809 MOSPD3O75425 235 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 ECI2O75521 394 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 CST3P01034 146 aaPredicted RBP7.98□□□□□ -1.13
NUP88-205ENST00000572809 MYL1P05976 194 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 FURINP09958 794 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 GJA1P17302 382 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 CEBPBP17676 345 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 TNNI1P19237 187 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 AOC1P19801 751 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 CYP2J2P51589 502 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 CDR1P51861 262 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 NDUFA8P51970 172 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 EPHA5P54756 1037 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 NHLH1Q02575 133 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 TCF15Q12870 199 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 BFSP1Q12934 665 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 STK4Q13043 487 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 SNRNP35Q16560 246 aaKnown RBP7.98□□□□□ -1.13
NUP88-205ENST00000572809 DBN1Q16643 649 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 BMT2Q1RMZ1 405 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 SLC44A4Q53GD3 710 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 TANGO2Q6ICL3 276 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 RIPOR1Q6ZS17 1223 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 ITIH5Q86UX2 942 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 WDR49Q8IV35 697 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 C12orf56Q8IXR9 622 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 TMEM86AQ8N2M4 240 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 PDCL2Q8N4E4 241 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 OR5B17Q8NGF7 314 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 SPPL2BQ8TCT7 592 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 C2orf15Q8WU43 125 aaKnown RBP7.98□□□□□ -1.13
NUP88-205ENST00000572809 ELSPBP1Q96BH3 223 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 HPDLQ96IR7 371 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 SHDQ96IW2 340 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 FNBP1Q96RU3 617 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 ACBD6Q9BR61 282 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 LRRC3Q9BY71 257 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 PLA2G2FQ9BZM2 168 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 MTMR12Q9C0I1 747 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 GPR88Q9GZN0 384 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 IRF2BPLQ9H1B7 796 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 DNAJC25Q9H1X3 360 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 ZFP14Q9HCL3 533 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 EXOC1Q9NV70 894 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 GDAP2Q9NXN4 497 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 DDX43Q9NXZ2 648 aaKnown RBP7.98□□□□□ -1.13
NUP88-205ENST00000572809 STIM2Q9P246 746 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 SNX9Q9Y5X1 595 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 SCN1AP35498 2009 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 NOTCH4Q99466 2003 aa7.98□□□□□ -1.13
NUP88-205ENST00000572809 A0A1W2PQ27 194 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 A0A1W2PQ64 194 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 A0A1W2PQD8 194 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 H0Y858 1186 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 EXOC3O60645 756 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 SOAT2O75908 522 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 ZNF202O95125 648 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 FGF19O95750 216 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 RPN1P04843 607 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 DLATP10515 647 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 HAPLN1P10915 354 aaPredicted RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 BRD2P25440 801 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 LHX1P48742 406 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 NUCB2P80303 420 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 MYL7Q01449 175 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 TSPY1Q01534 308 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 PFKPQ01813 784 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 SNW1Q13573 536 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 PSMD6Q15008 389 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 TEAD2Q15562 447 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 TAF12Q16514 161 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 NFE2Q16621 373 aaPredicted RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 MGAT5BQ3V5L5 792 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 FAM78AQ5JUQ0 283 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 CWF19L1Q69YN2 538 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 TMEM214Q6NUQ4 689 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 TRAPPC11Q7Z392 1133 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 ALYREFQ86V81 257 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 TTC9BQ8N6N2 239 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 TOP6BLQ8N6T0 577 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 FSIP1Q8NA03 581 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 GOLGA5Q8TBA6 731 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 SPATA18Q8TC71 538 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 SMARCD2Q92925 531 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 PSMG2Q969U7 264 aa7.97□□□□□ -1.13
NUP88-205ENST00000572809 GTPBP3Q969Y2 492 aaKnown RBP7.97□□□□□ -1.13
NUP88-205ENST00000572809 CCDC47Q96A33 483 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms