RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 PCED1BQ96HM7 432 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 HHIPQ96QV1 700 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 TRIM9Q9C026 710 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 SNX25Q9H3E2 840 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 MAGEF1Q9HAY2 307 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 CRTAC1Q9NQ79 661 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 UBE4BO95155 1302 aa16.59■□□□□ 0.25
TSR1-202ENST00000571806 SPTLC2O15270 562 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 HCRTO43612 131 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 STX6O43752 255 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 PDGFRBP09619 1106 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 HOXC13P31276 330 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 EIF2DP41214 584 aaKnown RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 TNNC1P63316 161 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 HSF5Q4G112 596 aaPredicted RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 USP39Q53GS9 565 aaKnown RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 STPG1Q5TH74 334 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 TDRD10Q5VZ19 366 aaKnown RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 SCARA3Q6AZY7 606 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 EPM2AIP1Q7L775 607 aaPredicted RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 HS2ST1Q7LGA3 356 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 DDX42Q86XP3 938 aaKnown RBP eCLIP16.58■□□□□ 0.24
TSR1-202ENST00000571806 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 SLITRK1Q96PX8 696 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 ELOVL4Q9GZR5 314 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 DUSP15Q9H1R2 295 aaPredicted RBP16.58■□□□□ 0.24
TSR1-202ENST00000571806 PTPRJQ12913 1337 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 SPAG17Q6Q759 2223 aa16.58■□□□□ 0.24
TSR1-202ENST00000571806 HELZP42694 1942 aaKnown RBP16.57■□□□□ 0.24
TSR1-202ENST00000571806 ZNF840PA6NDX5 716 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 LEFTY2O00292 366 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 STAU1O95793 577 aaKnown RBP16.57■□□□□ 0.24
TSR1-202ENST00000571806 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
TSR1-202ENST00000571806 ATICP31939 592 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 ASIC1P78348 528 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 MRPS21P82921 87 aaKnown RBP16.57■□□□□ 0.24
TSR1-202ENST00000571806 PSMD6Q15008 389 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 E2F4Q16254 413 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 CCDC142Q17RM4 750 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 WDR72Q3MJ13 1102 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 FAM26FQ5R3K3 315 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 ADGRG2Q8IZP9 1017 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 XXYLT1Q8NBI6 393 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 TSTD1Q8NFU3 115 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 OR6B3Q8NGW1 331 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 OVCA2Q8WZ82 227 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 EZH1Q92800 747 aaPredicted RBP16.57■□□□□ 0.24
TSR1-202ENST00000571806 CGRRF1Q99675 332 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 LINC00597Q9H2U6 94 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 AGPAT3Q9NRZ7 376 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 ANGPTL2Q9UKU9 493 aa16.57■□□□□ 0.24
TSR1-202ENST00000571806 CAVIN2O95810 425 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 OLFM2O95897 454 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 CST3P01034 146 aaPredicted RBP16.56■□□□□ 0.24
TSR1-202ENST00000571806 PTPN1P18031 435 aaKnown RBP16.56■□□□□ 0.24
TSR1-202ENST00000571806 HOXD13P35453 343 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 DGKEP52429 567 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 TRPC3Q13507 836 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 CCDC6Q16204 474 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 RDH13Q8NBN7 331 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 PDZD8Q8NEN9 1154 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 USP33Q8TEY7 942 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
TSR1-202ENST00000571806 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 FAM84AQ96KN4 292 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 C7orf25Q9BPX7 421 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
TSR1-202ENST00000571806 TBC1D14Q9P2M4 693 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 EML5Q05BV3 1969 aa16.56■□□□□ 0.24
TSR1-202ENST00000571806 ATP8B3O60423 1300 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 KIAA1549LQ6ZVL6 1849 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 BCLAF3A2AJT9 711 aaKnown RBP16.55■□□□□ 0.24
TSR1-202ENST00000571806 F8VP50 259 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 K7EQS6 105 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 TGFB1I1O43294 461 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 CUTAO60888 179 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 ALDH1A2O94788 518 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 RTN3O95197 1032 aaPredicted RBP16.55■□□□□ 0.24
TSR1-202ENST00000571806 YEATS4O95619 227 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 OAS1P00973 400 aaKnown RBP16.55■□□□□ 0.24
TSR1-202ENST00000571806 GBP1P32455 592 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 OPRD1P41143 372 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 AP3M2P53677 418 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 USP46P62068 366 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 SHC2P98077 582 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 CREB5Q02930 508 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 CYP24A1Q07973 514 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 PREPLQ4J6C6 727 aaPredicted RBP16.55■□□□□ 0.24
TSR1-202ENST00000571806 RNF43Q68DV7 783 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 NAIF1Q69YI7 327 aaPredicted RBP16.55■□□□□ 0.24
TSR1-202ENST00000571806 UNC13DQ70J99 1090 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 RASSF3Q86WH2 238 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 C12orf56Q8IXR9 622 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 GLIS3Q8NEA6 775 aa16.55■□□□□ 0.24
TSR1-202ENST00000571806 OTUB2Q96DC9 234 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms