RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 GRIA2P42262 883 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 SLC12A3P55017 1021 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 FAM193AP78312 1265 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 MYL7Q01449 175 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 NBR1Q14596 966 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 TRIP6Q15654 476 aaKnown RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 HYIQ5T013 277 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 NT5DC4Q86YG4 428 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 CAPN10Q9HC96 672 aa12.17□□□□□ -0.46
CHMP6-202ENST00000571457 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
CHMP6-202ENST00000571457 CFAP46Q8IYW2 2715 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 TCRBV21S2A2A0A5A6 115 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 C2orf78A6NCI8 922 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 K7ENM7 598 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ZBTB24O43167 697 aaPredicted RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 HUS1O60921 280 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ADH1CP00326 375 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 CYP17A1P05093 508 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 CD59P13987 128 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 TNFRSF4P43489 277 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ACOT2P49753 483 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 RESTQ13127 1097 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ZC2HC1CQ53FD0 456 aaPredicted RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 INTS6LQ5JSJ4 861 aaKnown RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 SLFN12LQ6IEE8 588 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ADGRG2Q8IZP9 1017 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 PDCL2Q8N4E4 241 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 MYCT1Q8N699 235 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 FRMD1Q8N878 549 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 LRRC15Q8TF66 581 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 CEP295NLQ96MC4 621 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 PARVGQ9HBI0 331 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 ARHGEF4Q9NR80 690 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 EHD2Q9NZN4 543 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 TRPM5Q9NZQ8 1165 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 APOBEC2Q9Y235 224 aaKnown RBP12.16□□□□□ -0.46
CHMP6-202ENST00000571457 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
CHMP6-202ENST00000571457 GOLGA4Q13439 2230 aaKnown RBP12.15□□□□□ -0.46
CHMP6-202ENST00000571457 ANAPC1Q9H1A4 1944 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 LEFTY2O00292 366 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 FAM13AO94988 1023 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 IL18RAPO95256 599 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 PCSK1P29120 753 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 MAGEA11P43364 429 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
CHMP6-202ENST00000571457 PPP3CCP48454 512 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 ZNF33AQ06730 810 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 DHCR24Q15392 516 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 IL17AQ16552 155 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 GAB4Q2WGN9 574 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 PREPLQ4J6C6 727 aaPredicted RBP12.15□□□□□ -0.46
CHMP6-202ENST00000571457 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 SLC39A4Q6P5W5 647 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 NUDT18Q6ZVK8 323 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 FILIP1Q7Z7B0 1213 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 REEP2Q9BRK0 252 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
CHMP6-202ENST00000571457 FAM124BQ9H5Z6 455 aaPredicted RBP12.15□□□□□ -0.46
CHMP6-202ENST00000571457 SUSD2Q9UGT4 822 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 GTF3C4Q9UKN8 822 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 AGO2Q9UKV8 859 aaKnown RBP12.15□□□□□ -0.46
CHMP6-202ENST00000571457 ADAMTS9Q9P2N4 1935 aa12.15□□□□□ -0.46
CHMP6-202ENST00000571457 HELZP42694 1942 aaKnown RBP12.14□□□□□ -0.47
CHMP6-202ENST00000571457 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 SH3BP5O60239 455 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 TRAK2O60296 914 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 ZNF217O75362 1048 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 LHX1P48742 406 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 TOB1P50616 345 aaPredicted RBP12.14□□□□□ -0.47
CHMP6-202ENST00000571457 NEK4P51957 841 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 HMGN5P82970 282 aaKnown RBP12.14□□□□□ -0.47
CHMP6-202ENST00000571457 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
CHMP6-202ENST00000571457 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 GLIS3Q8NEA6 775 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
CHMP6-202ENST00000571457 SPATA17Q96L03 361 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 PNMA5Q96PV4 448 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 PLIN2Q99541 437 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 PKMYT1Q99640 499 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 FSCN3Q9NQT6 498 aa12.14□□□□□ -0.47
CHMP6-202ENST00000571457 L1RE1Q9UN81 338 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms