RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PTPN20Q4JDL3 420 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 RNASEH2BQ5TBB1 312 aaKnown RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 THEMIS2Q5TEJ8 643 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 C1orf146Q5VVC0 180 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 SNX30Q5VWJ9 437 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 TSC22D3Q99576 134 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 MRPL4Q9BYD3 311 aaKnown RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 HAPLN2Q9GZV7 340 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 SPATS2LQ9NUQ6 558 aaKnown RBP16.01■□□□□ 0.15
USP43-202ENST00000570475 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
USP43-202ENST00000570475 CCDC160A6NGH7 325 aa16■□□□□ 0.15
USP43-202ENST00000570475 B4GALT5O43286 388 aa16■□□□□ 0.15
USP43-202ENST00000570475 ITGB3P05106 788 aa16■□□□□ 0.15
USP43-202ENST00000570475 ACO1P21399 889 aaKnown RBP16■□□□□ 0.15
USP43-202ENST00000570475 SESN2P58004 480 aaPredicted RBP16■□□□□ 0.15
USP43-202ENST00000570475 CRADDP78560 199 aa16■□□□□ 0.15
USP43-202ENST00000570475 LY6KQ17RY6 165 aa16■□□□□ 0.15
USP43-202ENST00000570475 SGSM1Q2NKQ1 1148 aa16■□□□□ 0.15
USP43-202ENST00000570475 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
USP43-202ENST00000570475 NIPA1Q7RTP0 329 aa16■□□□□ 0.15
USP43-202ENST00000570475 PCGF5Q86SE9 256 aa16■□□□□ 0.15
USP43-202ENST00000570475 RSPH3Q86UC2 560 aa16■□□□□ 0.15
USP43-202ENST00000570475 NDUFAF2Q8N183 169 aa16■□□□□ 0.15
USP43-202ENST00000570475 EFCAB3Q8N7B9 438 aa16■□□□□ 0.15
USP43-202ENST00000570475 POU5F2Q8N7G0 328 aa16■□□□□ 0.15
USP43-202ENST00000570475 GPRASP2Q96D09 838 aa16■□□□□ 0.15
USP43-202ENST00000570475 RPF1Q9H9Y2 349 aaKnown RBP16■□□□□ 0.15
USP43-202ENST00000570475 BATF3Q9NR55 127 aa16■□□□□ 0.15
USP43-202ENST00000570475 ZFATQ9P243 1243 aa16■□□□□ 0.15
USP43-202ENST00000570475 ARHGAP28Q9P2N2 729 aa16■□□□□ 0.15
USP43-202ENST00000570475 TTLL3Q9Y4R7 772 aa16■□□□□ 0.15
USP43-202ENST00000570475 BTAF1O14981 1849 aa16■□□□□ 0.15
USP43-202ENST00000570475 ARFGEF1Q9Y6D6 1849 aa16■□□□□ 0.15
USP43-202ENST00000570475 OAS1P00973 400 aaKnown RBP16■□□□□ 0.15
USP43-202ENST00000570475 CDKN2BP42772 138 aa16■□□□□ 0.15
USP43-202ENST00000570475 ATXN3P54252 364 aaPredicted RBP16■□□□□ 0.15
USP43-202ENST00000570475 AMHR2Q16671 573 aa16■□□□□ 0.15
USP43-202ENST00000570475 RASIP1Q5U651 963 aa16■□□□□ 0.15
USP43-202ENST00000570475 PHF13Q86YI8 300 aaPredicted RBP16■□□□□ 0.15
USP43-202ENST00000570475 ST6GALNAC4Q9H4F1 302 aa16■□□□□ 0.15
USP43-202ENST00000570475 SHOC2Q9UQ13 582 aa16■□□□□ 0.15
USP43-202ENST00000570475 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
USP43-202ENST00000570475 FCHO1O14526 889 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
USP43-202ENST00000570475 KRT37O76014 449 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 FGFR1P11362 822 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 TCF7P36402 384 aaPredicted RBP15.99■□□□□ 0.15
USP43-202ENST00000570475 RFC5P40937 340 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SLC8A3P57103 927 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SARNPP82979 210 aaKnown RBP15.99■□□□□ 0.15
USP43-202ENST00000570475 KLC1Q07866 573 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 LGSNQ5TDP6 509 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 MICALL2Q8IY33 904 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 CCNYQ8ND76 341 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SLCO2A1Q92959 643 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 ASCC2Q9H1I8 757 aaPredicted RBP15.99■□□□□ 0.15
USP43-202ENST00000570475 VCXQ9H320 206 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SLC5A4Q9NY91 659 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 PRKAG3Q9UGI9 489 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 KCNA2P16389 499 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SERPINB6P35237 376 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 CAPSQ13938 189 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 RASA2Q15283 850 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 C16orf46Q6P387 395 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 DLK2Q6UY11 383 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 RTKN2Q8IZC4 609 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SPDYE1Q8NFV5 336 aaPredicted RBP15.99■□□□□ 0.15
USP43-202ENST00000570475 DEPDC1BQ8WUY9 529 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 FBXL18Q96ME1 805 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 CPXM1Q96SM3 734 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 RABGEF1Q9UJ41 708 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 USP18Q9UMW8 372 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 MAP3K7O43318 606 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 LRCH4O75427 683 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 PGK2P07205 417 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 SKIP12755 728 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 GM2AP17900 193 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 KDELR1P24390 212 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 PLEKHG4Q58EX7 1191 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 TTC13Q8NBP0 860 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 ZNF280CQ8ND82 737 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 DHX35Q9H5Z1 703 aaKnown RBP15.99■□□□□ 0.15
USP43-202ENST00000570475 SLC24A2Q9UI40 661 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 AKT3Q9Y243 479 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 CNTNAP1P78357 1384 aa15.99■□□□□ 0.15
USP43-202ENST00000570475 OPHN1O60890 802 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 PEX11AO75192 247 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 TOP3BO95985 862 aaKnown RBP15.98■□□□□ 0.15
USP43-202ENST00000570475 DESP17661 470 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 AQP5P55064 265 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 YWHAEP62258 255 aaKnown RBP15.98■□□□□ 0.15
USP43-202ENST00000570475 TMEM132BQ14DG7 1078 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 TLDC1Q6P9B6 456 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 PRPF39Q86UA1 669 aaKnown RBP15.98■□□□□ 0.15
USP43-202ENST00000570475 IGDCC3Q8IVU1 814 aa15.98■□□□□ 0.15
USP43-202ENST00000570475 NME8Q8N427 588 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms