RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PRKG1Q13976 671 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 BOP1Q14137 746 aaKnown RBP4.33□□□□□ -1.72
UBR1-211ENST00000569971 PTK2BQ14289 1009 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 SLC29A2Q14542 456 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 NPY5RQ15761 445 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 ARHGAP15Q53QZ3 475 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 NOMO2Q5JPE7 1267 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 DOK3Q7L591 496 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 ANKRD18AQ8IVF6 992 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 ELOA2Q8IYF1 753 aaPredicted RBP4.33□□□□□ -1.72
UBR1-211ENST00000569971 AMER2Q8N7J2 671 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 NSUN7Q8NE18 718 aaKnown RBP4.33□□□□□ -1.72
UBR1-211ENST00000569971 IPCEF1Q8WWN9 437 aaPredicted RBP4.33□□□□□ -1.72
UBR1-211ENST00000569971 WWC2-AS2Q96NR7 200 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 TLR10Q9BXR5 811 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 CPEB1Q9BZB8 566 aaKnown RBP4.33□□□□□ -1.72
UBR1-211ENST00000569971 RRN3Q9NYV6 651 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 RGL1Q9NZL6 768 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 ATP11BQ9Y2G3 1177 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 EIF2AK4Q9P2K8 1649 aaKnown RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 ARAP3Q8WWN8 1544 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 KTN1Q86UP2 1357 aaKnown RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 LOC102723971A0A1B0GUV8 181 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 H7C4K7 107 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 SYT5O00445 386 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 CHEK2O96017 543 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 SRGNP10124 158 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 GNAT2P19087 354 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 COMTP21964 271 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 ACVR2AP27037 513 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 CHN2P52757 468 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 COPAP53621 1224 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 SLFN5Q08AF3 891 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 FOXO1Q12778 655 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 TCF15Q12870 199 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 ARHGEF7Q14155 803 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 PRKD1Q15139 912 aaPredicted RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 TIGD6Q17RP2 521 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 SLC4A8Q2Y0W8 1093 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 PLA1AQ53H76 456 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 MIIPQ5JXC2 388 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 PLAG1Q6DJT9 500 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 ZNF585AQ6P3V2 769 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 CYP26C1Q6V0L0 522 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 KIAA0408Q6ZU52 694 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 KRT28Q7Z3Y7 464 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 PPP1R32Q7Z5V6 425 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 CFAP52Q8N1V2 620 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 TEX19Q8NA77 164 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 MARS2Q96GW9 593 aaKnown RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 LRIG1Q96JA1 1093 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 SNX27Q96L92 541 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 CNPPD1Q9BV87 410 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 PLA2G12BQ9BX93 195 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 SIK2Q9H0K1 926 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 NECTIN3Q9NQS3 549 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 VSX1Q9NZR4 365 aaPredicted RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 HECAQ9UBI9 543 aaPredicted RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 HESX1Q9UBX0 185 aa4.32□□□□□ -1.72
UBR1-211ENST00000569971 RGS17Q9UGC6 210 aaPredicted RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 ZFR2Q9UPR6 939 aaKnown RBP4.32□□□□□ -1.72
UBR1-211ENST00000569971 ERCC6L2Q5T890 1561 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ABCC1P33527 1531 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ZBED9Q6R2W3 1325 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 IPO5O00410 1097 aaKnown RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 POLRMTO00411 1230 aaKnown RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 CYP27B1O15528 508 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 KCNQ3O43525 872 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 CYP2C9P11712 490 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 CKBP12277 381 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 FCER1AP12319 257 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 XRCC6P12956 609 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBR1-211ENST00000569971 HK1P19367 917 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 TOB1P50616 345 aaPredicted RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 ARL4CP56559 192 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 TGFB2P61812 414 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 GRM7Q14831 915 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 SPDYAQ5MJ70 313 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 RAP1GAP2Q684P5 730 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 FCRL6Q6DN72 434 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 MFSD5Q6N075 450 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 DRICH1Q6PGQ1 229 aaPredicted RBP4.31□□□□□ -1.72
UBR1-211ENST00000569971 CRTC1Q6UUV9 634 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 SLC30A10Q6XR72 485 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 KCTD20Q7Z5Y7 419 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 ZNF280BQ86YH2 543 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 SYT12Q8IV01 421 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 PALM2Q8IXS6 379 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 FAM9BQ8IZU0 186 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 OR52N2Q8NGI0 321 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 FAM71BQ8TC56 605 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 Q8TCH9 128 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 UBXN10Q96LJ8 280 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 TBATAQ96M53 351 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 SLC46A1Q96NT5 459 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 GNRHR2Q96P88 292 aa4.31□□□□□ -1.72
UBR1-211ENST00000569971 OR14A2Q96R54 314 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms