RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 MRPS31Q92665 395 aaKnown RBP11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 CYFIP2Q96F07 1278 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 TMEM176AQ96HP8 235 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 SMOQ99835 787 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 TRMT61BQ9BVS5 477 aaKnown RBP11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 DMAP1Q9NPF5 467 aaPredicted RBP11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 TRPV5Q9NQA5 729 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 ARHGEF3Q9NR81 526 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 FAM49BQ9NUQ9 324 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 DACH1Q9UI36 760 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 NUP210Q8TEM1 1887 aaPredicted RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 FAM92AA1XBS5 289 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 ARNTLO00327 626 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 BEST1O76090 585 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 RTN3O95197 1032 aaPredicted RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 AVPR2P30518 371 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 PPP3CCP48454 512 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 CLCN5P51795 746 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 STARD6P59095 220 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 CETN1Q12798 172 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 LRMPQ12912 555 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 GRM2Q14416 872 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 SLC44A4Q53GD3 710 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 ZNF394Q53GI3 561 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 CWF19L1Q69YN2 538 aaKnown RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 GPIHBP1Q8IV16 184 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 CELF5Q8N6W0 485 aaKnown RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 EHBP1Q8NDI1 1231 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 DNASE1L2Q92874 299 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 IRF7Q92985 503 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 USP13Q92995 863 aaPredicted RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 DNAI2Q9GZS0 605 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 MFSD1Q9H3U5 465 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 COMMD8Q9NX08 183 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 CA14Q9ULX7 337 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 ZNF638Q14966 1978 aaKnown RBP11.74□□□□□ -0.53
SHCBP1-207ENST00000569702 ZNF840PA6NDX5 716 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 HHLA1C9JL84 531 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ZNF263O14978 683 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 CHADO15335 359 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 FAM200BP0CF97 657 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 F5P12259 2224 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 PFKLP17858 780 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 AOC1P19801 751 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ACO1P21399 889 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 YWHAQP27348 245 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ADORA2BP29275 332 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 GDI1P31150 447 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 AVPR1AP37288 418 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 SLC5A3P53794 718 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 VCPP55072 806 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 YWHAEP62258 255 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 PRKCQQ04759 706 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 TAF10Q12962 218 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ZNF268Q14587 947 aaPredicted RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 MLF2Q15773 248 aaPredicted RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 PPP1R26Q5T8A7 1209 aaPredicted RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ARHGAP17Q68EM7 881 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 CLEC20AQ6ZU45 233 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 SCAMP5Q8TAC9 235 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 OVCA2Q8WZ82 227 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 SLC22A12Q96S37 553 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 CYP2S1Q96SQ9 504 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 DDX23Q9BUQ8 820 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 DUSP16Q9BY84 665 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 BRD9Q9H8M2 597 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 TDP1Q9NUW8 608 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 TRPM5Q9NZQ8 1165 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 RAPGEFL1Q9UHV5 662 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 CCL26Q9Y258 94 aa11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
SHCBP1-207ENST00000569702 C2orf78A6NCI8 922 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 SHISA7A6NL88 538 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 DPYSL4O14531 572 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 PI15O43692 258 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 OLFM2O95897 454 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 USP17L7P0C7H9 530 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 ZDHHC11BP0C7U3 371 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 GCNT1Q02742 428 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 TPD52L1Q16890 204 aaPredicted RBP11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 ARHGAP29Q52LW3 1261 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 SNX30Q5VWJ9 437 aa11.72□□□□□ -0.53
SHCBP1-207ENST00000569702 ARHGEF19Q8IW93 802 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms