RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TTLL2Q9BWV7 592 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 B3GNT5Q9BYG0 378 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 RNF38Q9H0F5 515 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 ECT2Q9H8V3 914 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 MAGEC2Q9UBF1 373 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 UXTQ9UBK9 157 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 HPSEQ9Y251 543 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 MYO18AQ92614 2054 aaKnown RBP14.77□□□□□ -0.04
GTF3C1-211ENST00000569653 TRAV19A0A0A6YYK7 116 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 SCAMP3O14828 347 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 CKMP06732 381 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 CHRM1P11229 460 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 PTPN1P18031 435 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 GRIK1P39086 918 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 GALK1P51570 392 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 NRLP54845 237 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 SNRPFP62306 86 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 CLDN10P78369 228 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 SPEM2Q0P670 501 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 BECN1Q14457 450 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 VSTM1Q6UX27 236 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 C4orf50Q6ZRC1 276 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 PRR23BQ6ZRT6 265 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 HS2ST1Q7LGA3 356 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 TTC16Q8NEE8 873 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 OR6B3Q8NGW1 331 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 PARD3BQ8TEW8 1205 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 OSCP1Q8WVF1 389 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 FNBP1Q96RU3 617 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 FAM13BQ9NYF5 915 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 NXF1Q9UBU9 619 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 ARHGAP26Q9UNA1 814 aa14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 CNOT1A5YKK6 2376 aaKnown RBP14.77□□□□□ -0.05
GTF3C1-211ENST00000569653 ZNF840PA6NDX5 716 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 EXOC3O60645 756 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 RNF40O75150 1001 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 OLFM2O95897 454 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 C4BPAP04003 597 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 USP17L7P0C7H9 530 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 TCF3P15923 654 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 HOXA6P31267 233 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 MESP2Q0VG99 397 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 SIM2Q14190 667 aaPredicted RBP14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 PDGFRLQ15198 375 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 DENND5BQ6ZUT9 1274 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 WDR5BQ86VZ2 330 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 LONP2Q86WA8 852 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 SFTPA1Q8IWL2 248 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 ABCA7Q8IZY2 2146 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 SYNPOQ8N3V7 929 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 DUS2Q9NX74 493 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 HMGXB4Q9UGU5 601 aa14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-211ENST00000569653 OAS1P00973 400 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 HDCP19113 662 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 OPRD1P41143 372 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 PGFP49763 221 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 ATXN1P54253 815 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 TNNC1P63316 161 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 NOP14P78316 857 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 FOXK2Q01167 660 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 TAF10Q12962 218 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 ORC1Q13415 861 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 PUM1Q14671 1186 aaKnown RBP eCLIP14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 LAIR1Q6GTX8 287 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 SCARA5Q6ZMJ2 495 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 DGLUCYQ7Z3D6 616 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 SLC9A9Q8IVB4 645 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 FAM160A2Q8N612 972 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 B3GALNT2Q8NCR0 500 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 C8orf48Q96LL4 319 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 P2RY13Q9BPV8 354 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 VRTNQ9H8Y1 702 aa14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 TPRP12270 2363 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-211ENST00000569653 LEFTY2O00292 366 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 TNFRSF10BO14763 440 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 FAM163BP0C2L3 166 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 CMA1P23946 247 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 SLC7A9P82251 487 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 GRSF1Q12849 480 aaKnown RBP eCLIP14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 NCOA4Q13772 614 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 KCNB1Q14721 858 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 PPP2R5DQ14738 602 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 MAPRE1Q15691 268 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 SPOPLQ6IQ16 392 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 CC2D1AQ6P1N0 951 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 CEP57L1Q8IYX8 460 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 ZMIZ2Q8NF64 920 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 SCAMP5Q8TAC9 235 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 TMEM174Q8WUU8 243 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 WBP2Q969T9 261 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 ZFRQ96KR1 1074 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 HHIPQ96QV1 700 aa14.74□□□□□ -0.05
GTF3C1-211ENST00000569653 GOLPH3LQ9H4A5 285 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms