RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 KRT9P35527 623 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 GPR15P49685 360 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 CLEC20AQ6ZU45 233 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 NUP93Q8N1F7 819 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 GPR152Q8TDT2 470 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 TFAP2BQ92481 460 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 SUSD6Q92537 303 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 TRMT2BQ96GJ1 504 aaKnown RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 SMOQ99835 787 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 PDCL3Q9H2J4 239 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 PRDM6Q9NQX0 595 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 XPO1O14980 1071 aaKnown RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 MICAL2O94851 1124 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 RHOP08100 348 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 PNMA6AP0CW24 399 aaPredicted RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 MYL4P12829 197 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 CYP11B1P15538 503 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 FSHRP23945 695 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 CDC25CP30307 473 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 CLCN1P35523 988 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 CACNA2D1P54289 1103 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 EPHA5P54756 1037 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 TFF2Q03403 129 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 SMAD2Q15796 467 aaKnown RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 PTPN21Q16825 1174 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 SDHAF4Q5VUM1 108 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 SLC47A2Q86VL8 602 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 ZNF677Q86XU0 584 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 VSTM4Q8IW00 320 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 MYRFLQ96LU7 910 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 KCNK16Q96T55 309 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 FBXO44Q9H4M3 255 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 DNMT3BQ9UBC3 853 aaKnown RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 MAGED2Q9UNF1 606 aaPredicted RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 LUC7L2Q9Y383 392 aaKnown RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 MRPS23Q9Y3D9 190 aaKnown RBP9.64□□□□□ -0.87
CHD9-219ENST00000569225 YWHAQP27348 245 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 PLA2G4AP47712 749 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 PPP3CCP48454 512 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 SLC5A3P53794 718 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 SNX16P57768 344 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 ZBED6P86452 979 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 PDE4CQ08493 712 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 ASIC2Q16515 512 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 ARHGAP15Q53QZ3 475 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 SFMBT2Q5VUG0 894 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 OTOP3Q7RTS5 596 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 TTC30AQ86WT1 665 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 PDZD8Q8NEN9 1154 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 UBA3Q8TBC4 463 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 BAP1Q92560 729 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 SECISBP2LQ93073 1101 aaKnown RBP9.63□□□□□ -0.87
CHD9-219ENST00000569225 MRFAP1L1Q96HT8 127 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 SLITRK1Q96PX8 696 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 ZSWIM1Q9BR11 485 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 TTLL2Q9BWV7 592 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 TTYH3Q9C0H2 523 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 HCFC1R1Q9NWW0 138 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHD9-219ENST00000569225 ZMYM5Q9UJ78 669 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 CAPN11Q9UMQ6 739 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 PCDHGC3Q9UN70 934 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 NR2E1Q9Y466 385 aa9.63□□□□□ -0.87
CHD9-219ENST00000569225 ZFP37Q9Y6Q3 630 aaPredicted RBP9.63□□□□□ -0.87
CHD9-219ENST00000569225 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 BEST1O76090 585 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 LSM8O95777 96 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 HMGA1P17096 107 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 KCNA4P22459 653 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ZNF75DP51815 510 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ARID5AQ03989 594 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 TRIM72Q6ZMU5 477 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 PIGZQ86VD9 579 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 TMC8Q8IU68 726 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 HS6ST3Q8IZP7 471 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 SIX6OS1Q8N1H7 587 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 MSANTD4Q8NCY6 345 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ZMIZ2Q8NF64 920 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 STK32AQ8WU08 396 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 OVCA2Q8WZ82 227 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 MRPS31Q92665 395 aaKnown RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 SYN2Q92777 582 aaPredicted RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 ACSF2Q96CM8 615 aaPredicted RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 ASB2Q96Q27 587 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 PHF7Q9BWX1 381 aaPredicted RBP9.62□□□□□ -0.87
CHD9-219ENST00000569225 LHX5Q9H2C1 402 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ATXN3LQ9H3M9 355 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 POMKQ9H5K3 350 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 LRRC4Q9HBW1 653 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 ACP6Q9NPH0 428 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 TMEM30AQ9NV96 361 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 TRPM5Q9NZQ8 1165 aa9.62□□□□□ -0.87
CHD9-219ENST00000569225 PRKAG3Q9UGI9 489 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms