RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ZNF560Q96MR9 790 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 ACBD6Q9BR61 282 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 LARP6Q9BRS8 491 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 FSCN3Q9NQT6 498 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 TRPM5Q9NZQ8 1165 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 KCND2Q9NZV8 630 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 GCNT4Q9P109 453 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 C2CD2Q9Y426 696 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 PCDHGB2Q9Y5G2 931 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 ABCA7Q8IZY2 2146 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 ASXL3Q9C0F0 2248 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 PDCD11Q14690 1871 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 A0A1B0GTW7 788 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 KPNA7A9QM74 516 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 LEFTY2O00292 366 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 HNRNPDLO14979 420 aaKnown RBP9.31□□□□□ -0.92
SMG1-216ENST00000569122 FLRT2O43155 660 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 HLA-EP13747 358 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 HNRNPLP14866 589 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMG1-216ENST00000569122 CDC25AP30304 524 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 NTSR1P30989 418 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 GUCY2FP51841 1108 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 GAD2Q05329 585 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 DDR2Q16832 855 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 CFAP221Q4G0U5 840 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 WSCD1Q658N2 575 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 JADE1Q6IE81 842 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 SLCO6A1Q86UG4 719 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 TMEM86AQ8N2M4 240 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 ZNF513Q8N8E2 541 aaPredicted RBP9.31□□□□□ -0.92
SMG1-216ENST00000569122 SNX29Q8TEQ0 813 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 KCNN1Q92952 543 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 HSPA12BQ96MM6 686 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 CALCOCO1Q9P1Z2 691 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 PCDHB6Q9Y5E3 794 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 URB1O60287 2271 aaKnown RBP9.31□□□□□ -0.92
SMG1-216ENST00000569122 ARID2Q68CP9 1835 aa9.31□□□□□ -0.92
SMG1-216ENST00000569122 IGHV1OR15-9A0A0B4J2B8 117 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 TEX51A0A1B0GUA7 166 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 PPEF2O14830 753 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 HUS1O60921 280 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 ADAM23O75077 832 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 TADA3O75528 432 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 CYP17A1P05093 508 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 ADH5P11766 374 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 CDK4P11802 303 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 HOXB2P14652 356 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 CYP2F1P24903 491 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 PCSK1P29120 753 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 TNFSF9P41273 254 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 MATKP42679 507 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 MAGEA11P43364 429 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 TRAPPC10P48553 1259 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 LHX1P48742 406 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 SLC7A9P82251 487 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
SMG1-216ENST00000569122 GRIK2Q13002 908 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 ZNF174Q15697 407 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 ECM1Q16610 540 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 C4orf50Q6ZRC1 276 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 FILIP1Q7Z7B0 1213 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 NT5DC4Q86YG4 428 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 SPATA2LQ8IUW3 424 aaPredicted RBP9.3□□□□□ -0.92
SMG1-216ENST00000569122 DEFB119Q8N690 84 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 OR2I1PQ8NGU4 316 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 RHBDD1Q8TEB9 315 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 LRRC15Q8TF66 581 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 BAP1Q92560 729 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 SPATA17Q96L03 361 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 SLC22A12Q96S37 553 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 MSTO1Q9BUK6 570 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 DPP3Q9NY33 737 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 DEC1Q9P2X7 70 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 STARD13Q9Y3M8 1113 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 NUP210Q8TEM1 1887 aaPredicted RBP9.3□□□□□ -0.92
SMG1-216ENST00000569122 APC2O95996 2303 aa9.3□□□□□ -0.92
SMG1-216ENST00000569122 CELSR3Q9NYQ7 3312 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 A0A0B4J269 797 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 C2orf78A6NCI8 922 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 E9PMD0 336 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 WNT7AO00755 349 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 TNFSF14O43557 240 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 C1QL1O75973 258 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 DKK1O94907 266 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 PIGRP01833 764 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 PRB1P04280 392 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 GABRG2P18507 467 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 ANXA13P27216 316 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 SLC6A11P48066 632 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 GPR15P49685 360 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 MAPK7Q13164 816 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 E2F5Q15329 346 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 MAPRE1Q15691 268 aaKnown RBP9.29□□□□□ -0.92
SMG1-216ENST00000569122 SMAD1Q15797 465 aaKnown RBP9.29□□□□□ -0.92
SMG1-216ENST00000569122 INAVAQ3KP66 663 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
SMG1-216ENST00000569122 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms