RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SNX14Q9Y5W7 946 aa6.7□□□□□ -1.34
UBR1-208ENST00000569066 GRXCR1A8MXD5 290 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 J3KTA2 159 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 IRAK2O43187 625 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 ACTL6BO94805 426 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 SEC24CP53992 1094 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 ARL4CP56559 192 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 JAG1P78504 1218 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 NSUN2Q08J23 767 aaKnown RBP eCLIP6.69□□□□□ -1.34
UBR1-208ENST00000569066 LY6KQ17RY6 165 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 GDF7Q7Z4P5 450 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 Q8TCH9 128 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 UBE2Q2Q8WVN8 375 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 GRAMD1AQ96CP6 724 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 TMEM8AQ9HCN3 771 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 IFT80Q9P2H3 777 aaPredicted RBP6.69□□□□□ -1.34
UBR1-208ENST00000569066 KAT6BQ8WYB5 2073 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 AQP7P3A6NL99 342 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 PATE3B3GLJ2 98 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 NCR1O76036 304 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 GATA3P23771 443 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 HIBADHP31937 336 aaKnown RBP6.69□□□□□ -1.34
UBR1-208ENST00000569066 HHEXQ03014 270 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 DEPDC1Q5TB30 811 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 ARL6IP4Q66PJ3 421 aaKnown RBP6.69□□□□□ -1.34
UBR1-208ENST00000569066 NAIF1Q69YI7 327 aaPredicted RBP6.69□□□□□ -1.34
UBR1-208ENST00000569066 LCNL1Q6ZST4 164 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 ANKRD35Q8N283 1001 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 IL17REQ8NFR9 667 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 SMCR8Q8TEV9 937 aaPredicted RBP6.69□□□□□ -1.34
UBR1-208ENST00000569066 PTDSS2Q9BVG9 487 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 VPS51Q9UID3 782 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 DAPP1Q9UN19 280 aa6.69□□□□□ -1.34
UBR1-208ENST00000569066 XDHP47989 1333 aa6.68□□□□□ -1.34
UBR1-208ENST00000569066 F5H697 171 aa6.68□□□□□ -1.34
UBR1-208ENST00000569066 ANXA11P50995 505 aaKnown RBP6.68□□□□□ -1.34
UBR1-208ENST00000569066 CRHR2Q13324 411 aa6.68□□□□□ -1.34
UBR1-208ENST00000569066 RRP1BQ14684 758 aaKnown RBP6.68□□□□□ -1.34
UBR1-208ENST00000569066 ICAM4Q14773 271 aa6.68□□□□□ -1.34
UBR1-208ENST00000569066 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
UBR1-208ENST00000569066 CRYL1Q9Y2S2 319 aa6.68□□□□□ -1.34
UBR1-208ENST00000569066 CD3EAPO15446 510 aaKnown RBP6.67□□□□□ -1.34
UBR1-208ENST00000569066 ZSCAN22P10073 491 aaPredicted RBP6.67□□□□□ -1.34
UBR1-208ENST00000569066 NPTX2P47972 431 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 MAN2A2P49641 1150 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 BCAT1P54687 386 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 DYRK1AQ13627 763 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 TAF12Q16514 161 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 XP32Q5T750 250 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 USP17L6PQ6QN14 398 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 HEATR4Q86WZ0 1026 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 CPOQ8IVL8 374 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 SPARTQ8N0X7 666 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 TEX19Q8NA77 164 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 EID2BQ96D98 161 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 MCRS1Q96EZ8 462 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 TRIM5Q9C035 493 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 FAM83DQ9H4H8 585 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 FER1L4A9Z1Z3 1794 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 PRAMEF33A0A0G2JMD5 474 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 BTBD11A6QL63 1104 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 PRAMEF10O60809 474 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 FAM20BO75063 409 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 LRPAP1P30533 357 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 CXADRP78310 365 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 UBXN11Q5T124 520 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 FOXR2Q6PJQ5 311 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 MAMDC4Q6UXC1 1216 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 CLNKQ7Z7G1 428 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 C2CD5Q86YS7 1000 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 RASGRP3Q8IV61 690 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 SLC15A3Q8IY34 581 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
UBR1-208ENST00000569066 SNX19Q92543 992 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 MPP4Q96JB8 637 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 RTKNQ9BST9 563 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 TAF1DQ9H5J8 278 aaPredicted RBP6.67□□□□□ -1.34
UBR1-208ENST00000569066 ZBTB26Q9HCK0 441 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 DNAJB11Q9UBS4 358 aa6.67□□□□□ -1.34
UBR1-208ENST00000569066 TAF5LO75529 589 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 PGDP52209 483 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 ALDH18A1P54886 795 aaKnown RBP6.66□□□□□ -1.34
UBR1-208ENST00000569066 CYP2A13Q16696 494 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 LRRTM4Q86VH4 590 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 TMTC1Q8IUR5 882 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 C11orf44Q8N8P7 122 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 SEPSECSQ9HD40 501 aaKnown RBP6.66□□□□□ -1.34
UBR1-208ENST00000569066 HERC5Q9UII4 1024 aaKnown RBP6.66□□□□□ -1.34
UBR1-208ENST00000569066 GOLGA6L6A8MZA4 724 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 PPM1DO15297 605 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 ZSCAN9O15535 394 aaPredicted RBP6.66□□□□□ -1.34
UBR1-208ENST00000569066 DHHO43323 396 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 RHOBTB3O94955 611 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 NTSR2O95665 410 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 VIPP01282 170 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 CFIP05156 583 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 TNFAIP3P21580 790 aa6.66□□□□□ -1.34
UBR1-208ENST00000569066 CD6P30203 668 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms