RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 INCA1Q0VD86 236 aa31.26■■■□□ 2.59
RAB40C-211ENST00000568586 SPOPLQ6IQ16 392 aa31.26■■■□□ 2.59
RAB40C-211ENST00000568586 MAMSTRQ6ZN01 415 aa31.26■■■□□ 2.59
RAB40C-211ENST00000568586 FAXDC2Q96IV6 333 aa31.26■■■□□ 2.59
RAB40C-211ENST00000568586 ZFYVE19Q96K21 471 aa31.26■■■□□ 2.59
RAB40C-211ENST00000568586 CYP3A43Q9HB55 503 aa31.26■■■□□ 2.59
RAB40C-211ENST00000568586 APOBEC3GQ9HC16 384 aaKnown RBP31.26■■■□□ 2.59
RAB40C-211ENST00000568586 CLDN5O00501 218 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 SLC16A3O15427 465 aaKnown RBP31.25■■■□□ 2.59
RAB40C-211ENST00000568586 KINO60870 393 aaKnown RBP31.25■■■□□ 2.59
RAB40C-211ENST00000568586 GADD45BO75293 160 aaPredicted RBP31.25■■■□□ 2.59
RAB40C-211ENST00000568586 PMS1P54277 932 aaKnown RBP31.25■■■□□ 2.59
RAB40C-211ENST00000568586 KRT39Q6A163 491 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 ANKRD40Q6AI12 368 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 RALGPS2Q86X27 583 aaPredicted RBP31.25■■■□□ 2.59
RAB40C-211ENST00000568586 EEF2KMTQ96G04 330 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 SLC22A12Q96S37 553 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 TSG101Q99816 390 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 IMPG2Q9BZV3 1241 aa31.25■■■□□ 2.59
RAB40C-211ENST00000568586 WDR87Q6ZQQ6 2873 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 TRAV19A0A0A6YYK7 116 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 USP17L7P0C7H9 530 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 EPB41P11171 864 aaKnown RBP31.24■■■□□ 2.59
RAB40C-211ENST00000568586 TCF3P15923 654 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 NDST1P52848 882 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 FUKQ8N0W3 1084 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 RIN3Q8TB24 985 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 GTSE1Q9NYZ3 720 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 IL37Q9NZH6 218 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 ANAPC1Q9H1A4 1944 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 ATP8B3O60423 1300 aa31.24■■■□□ 2.59
RAB40C-211ENST00000568586 RIF1Q5UIP0 2472 aaKnown RBP31.23■■■□□ 2.59
RAB40C-211ENST00000568586 ZNF840PA6NDX5 716 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 STX10O60499 249 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 CCNE1P24864 410 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 ACOT1Q86TX2 421 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 FAM35AQ86V20 835 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 DHTKD1Q96HY7 919 aaPredicted RBP31.23■■■□□ 2.59
RAB40C-211ENST00000568586 CYP2S1Q96SQ9 504 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 IER2Q9BTL4 223 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 NIF3L1Q9GZT8 377 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 CHRDQ9H2X0 955 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 GKN1Q9NS71 199 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 TRPM5Q9NZQ8 1165 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 MAN1B1Q9UKM7 699 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 FBXO4Q9UKT5 387 aa31.23■■■□□ 2.59
RAB40C-211ENST00000568586 SPECC1L-ADORA2AF8WAN1 911 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 SP9P0CG40 484 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 CTHP32929 405 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 PPP1R2P41236 205 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 PDE6CP51160 858 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 KPNA1P52294 538 aaPredicted RBP31.22■■■□□ 2.59
RAB40C-211ENST00000568586 TNK2Q07912 1038 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 ZNF528Q3MIS6 628 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 FOXR2Q6PJQ5 311 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 NUP93Q8N1F7 819 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 SMARCD1Q96GM5 515 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 HMGXB4Q9UGU5 601 aa31.22■■■□□ 2.59
RAB40C-211ENST00000568586 C2orf78A6NCI8 922 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 TNFRSF10BO14763 440 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 CLSTN1O94985 981 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 CHRNB1P11230 501 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 ZNF77Q15935 545 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 ITPRIPL2Q3MIP1 535 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 FRMD5Q7Z6J6 570 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 KCNK16Q96T55 309 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 CSNK1G1Q9HCP0 422 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 TRPC7Q9HCX4 862 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 HPS4Q9NQG7 708 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 SPATA6Q9NWH7 488 aaPredicted RBP31.21■■■□□ 2.59
RAB40C-211ENST00000568586 NDRG2Q9UN36 371 aaKnown RBP31.21■■■□□ 2.59
RAB40C-211ENST00000568586 ARHGAP26Q9UNA1 814 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 COQ4Q9Y3A0 265 aa31.21■■■□□ 2.59
RAB40C-211ENST00000568586 RTN3O95197 1032 aaPredicted RBP31.2■■■□□ 2.59
RAB40C-211ENST00000568586 OLFM2O95897 454 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 HDCP19113 662 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 BMP6P22004 513 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 SOX9P48436 509 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 MXI1P50539 228 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 TAF10Q12962 218 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 USP4Q13107 963 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 TXNDC11Q6PKC3 985 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 KIAA1958Q8N8K9 716 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 ARL14EPQ8N8R7 260 aaPredicted RBP31.2■■■□□ 2.59
RAB40C-211ENST00000568586 FBXL13Q8NEE6 735 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 OVCA2Q8WZ82 227 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 SEMA4DQ92854 862 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 FAM124BQ9H5Z6 455 aaPredicted RBP31.2■■■□□ 2.59
RAB40C-211ENST00000568586 DMAP1Q9NPF5 467 aaPredicted RBP31.2■■■□□ 2.59
RAB40C-211ENST00000568586 COMMD8Q9NX08 183 aa31.2■■■□□ 2.59
RAB40C-211ENST00000568586 ZNF638Q14966 1978 aaKnown RBP31.19■■■□□ 2.58
RAB40C-211ENST00000568586 PATJQ8NI35 1801 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 FAM92AA1XBS5 289 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 PSMA7O14818 248 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 CKMP06732 381 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 CD44P16070 742 aaKnown RBP31.19■■■□□ 2.58
RAB40C-211ENST00000568586 STIM1Q13586 685 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 PDGFRLQ15198 375 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 CCDC150Q8NCX0 1101 aa31.19■■■□□ 2.58
RAB40C-211ENST00000568586 WHAMMQ8TF30 809 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms