RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 BFSP2Q13515 415 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 PPP1R7Q15435 360 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SMYD5Q6GMV2 418 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 TTC27Q6P3X3 843 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 TRAF7Q6Q0C0 670 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 MFSD7Q6UXD7 560 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 ANKS1BQ7Z6G8 1248 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 PIGZQ86VD9 579 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 JAMLQ86YT9 394 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FUKQ8N0W3 1084 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 KRT222Q8N1A0 295 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SLC43A3Q8NBI5 491 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 RAPGEF5Q92565 580 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 HAUS1Q96CS2 278 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 RBM41Q96IZ5 413 aaKnown RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 FAM193BQ96PV7 902 aaPredicted RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 SYT15Q9BQS2 421 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 TRAIPQ9BWF2 469 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 RAB17Q9H0T7 212 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 RGS18Q9NS28 235 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 ASNSD1Q9NWL6 643 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 OGFRQ9NZT2 677 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 LCMT1Q9UIC8 334 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 RASAL2Q9UJF2 1139 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 PRG3Q9Y2Y8 225 aaPredicted RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 SQORQ9Y6N5 450 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 MYBPHLA2RUH7 354 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 C9IYK1 514 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FSCN2O14926 492 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 ATP8B1O43520 1251 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 BEST1O76090 585 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 ITGB1P05556 798 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 KRT7P08729 469 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FAM153BP0C7A2 387 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SETSIPP0DME0 302 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 ODC1P11926 461 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 DESP17661 470 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 IL1R2P27930 398 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SDC4P31431 198 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 COILP38432 576 aaPredicted RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 CCL23P55773 120 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FAM153CQ494X1 144 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 KIAA0319Q5VV43 1072 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 TMEM110Q86TL2 294 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 METTL23Q86XA0 190 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 ZNF280BQ86YH2 543 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FAM126BQ8IXS8 530 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 RCOR2Q8IZ40 523 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 KCTD6Q8NC69 237 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FNIP1Q8TF40 1166 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 AENQ8WTP8 325 aaKnown RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 MAIP1Q8WWC4 291 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 NDRG1Q92597 394 aaKnown RBP7.42□□□□□ -1.22
SMG1-215ENST00000568239 RUBCNQ92622 972 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SCLYQ96I15 445 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SLITRK1Q96PX8 696 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 CALN1Q9BXU9 219 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SLC4A5Q9BY07 1137 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 LRRC4Q9HBW1 653 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 KRT82Q9NSB4 513 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 FAM153AQ9UHL3 310 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 SNX24Q9Y343 169 aa7.42□□□□□ -1.22
SMG1-215ENST00000568239 C2CD4BA6NLJ0 364 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 GABRDO14764 452 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PRPSAP2O60256 369 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 NBNO60934 754 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ECEL1O95672 775 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 NPR3P17342 541 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 VPS41P49754 854 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ZNF143P52747 638 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ADCY2Q08462 1091 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ADIGQ0VDE8 80 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 GPS2Q13227 327 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 DHX34Q14147 1143 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 SIX1Q15475 284 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 TRIP13Q15645 432 aaPredicted RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 RAB6CQ53S08 254 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 EMBQ6PCB8 327 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 OLFML1Q6UWY5 402 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 TMEM86AQ8N2M4 240 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ARFGAP1Q8N6T3 406 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 NIPA2Q8N8Q9 360 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 URGCPQ8TCY9 931 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 PCED1BQ96HM7 432 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 ERP44Q9BS26 406 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 RAB6CQ9H0N0 254 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 DDX56Q9NY93 547 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 LRFN2Q9ULH4 789 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 USP18Q9UMW8 372 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 R3HDM2Q9Y2K5 976 aaKnown RBP7.41□□□□□ -1.22
SMG1-215ENST00000568239 FRMPD3Q5JV73 1810 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 SYNJ2BP-COX16A0A087WUM0 186 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 MAP2K7O14733 419 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 AP1G2O75843 785 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 GABBR2O75899 941 aa7.41□□□□□ -1.22
SMG1-215ENST00000568239 TJP3O95049 919 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms