RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 VSTM1Q6UX27 236 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 MAMSTRQ6ZN01 415 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 RBM43Q6ZSC3 357 aaKnown RBP13.74□□□□□ -0.21
TSC2-220ENST00000568238 MYCBPAPQ8TBZ2 947 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 NELFBQ8WX92 580 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 RUBCNQ92622 972 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 CEP295NLQ96MC4 621 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 TSG101Q99816 390 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 MRPL45Q9BRJ2 306 aaKnown RBP13.74□□□□□ -0.21
TSC2-220ENST00000568238 TRAF3IP3Q9Y228 551 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 MYH10P35580 1976 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 TRIM66O15016 1216 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 LILRB5O75023 590 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 CLSTN1O94985 981 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 CKMP06732 381 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 BDNFP23560 247 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 NR2F2P24468 414 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 ANXA13P27216 316 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 ATICP31939 592 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 GNL1P36915 607 aaPredicted RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 GRIK1P39086 918 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 PPP1R2P41236 205 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 NRLP54845 237 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 STX17P56962 302 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 MYL6P60660 151 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 SATB1Q01826 763 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 PAK1Q13153 545 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 BIRC3Q13489 604 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 GAS6Q14393 721 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 PON2Q15165 354 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 ZNF699Q32M78 642 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 DGKKQ5KSL6 1271 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 TDRD10Q5VZ19 366 aaKnown RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 CEP135Q66GS9 1140 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 ANKRD40Q6AI12 368 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 CC2D1AQ6P1N0 951 aaPredicted RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 SASS6Q6UVJ0 657 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 SPEM1Q8N4L4 309 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 MLKLQ8NB16 471 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 RIN3Q8TB24 985 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 EEF2KMTQ96G04 330 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 PCED1BQ96HM7 432 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 DHTKD1Q96HY7 919 aaPredicted RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 SPATA17Q96L03 361 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 FAM83CQ9BQN1 747 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 XYLT2Q9H1B5 865 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 EBF3Q9H4W6 596 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 HPS4Q9NQG7 708 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 GKN1Q9NS71 199 aa13.73□□□□□ -0.21
TSC2-220ENST00000568238 RBM12Q9NTZ6 932 aaKnown RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
TSC2-220ENST00000568238 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 ATG2BQ96BY7 2078 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
TSC2-220ENST00000568238 FAM163BP0C2L3 166 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 RPL13P26373 211 aaKnown RBP13.72□□□□□ -0.21
TSC2-220ENST00000568238 CXCL12P48061 93 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 AP3M2P53677 418 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 USP4Q13107 963 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 RUNX3Q13761 415 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 CCINQ13939 588 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 MTF1Q14872 753 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
TSC2-220ENST00000568238 EDRF1Q3B7T1 1238 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 WDR44Q5JSH3 913 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 TRIM68Q6AZZ1 485 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 Q6ZS52 159 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 DENND5BQ6ZUT9 1274 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 SLC9A9Q8IVB4 645 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 B3GALNT2Q8NCR0 500 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 PLEKHO2Q8TD55 490 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 PARD3BQ8TEW8 1205 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 TMEM174Q8WUU8 243 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 SMYD3Q9H7B4 428 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 EHD2Q9NZN4 543 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 NME7Q9Y5B8 376 aa13.72□□□□□ -0.21
TSC2-220ENST00000568238 BICDL2A1A5D9 508 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 A8MXQ7 604 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 F8VP50 259 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 PTPN1P18031 435 aaKnown RBP13.71□□□□□ -0.21
TSC2-220ENST00000568238 PDE6CP51160 858 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 CLDN10P78369 228 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 ADAM9Q13443 819 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 NCOA4Q13772 614 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 PDGFRLQ15198 375 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 ZNF77Q15935 545 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 NFIL3Q16649 462 aa13.71□□□□□ -0.21
TSC2-220ENST00000568238 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms