RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ERVK-21P61565 698 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 DSC3Q14574 896 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 PTPROQ16827 1216 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 PTPN20Q4JDL3 420 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 CCNI2Q6ZMN8 369 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-221ENST00000567935 HDXQ7Z353 690 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 CRYBG2Q8N1P7 616 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 APPL2Q8NEU8 664 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 SPATA18Q8TC71 538 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 KRT35Q92764 455 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 TNIP3Q96KP6 325 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 SNX25Q9H3E2 840 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 CYLDQ9NQC7 956 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 ZNF446Q9NWS9 450 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 KLK14Q9P0G3 267 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 HESX1Q9UBX0 185 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 HMGXB4Q9UGU5 601 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 CHORDC1Q9UHD1 332 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-221ENST00000567935 PADI3Q9ULW8 664 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 A0A0U1RQF3 1178 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 LINC01553A4QN01 128 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 FAM187AA6NFU0 413 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 PTGESO14684 152 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 HUS1O60921 280 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 THP07101 528 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 WARSP23381 471 aaKnown RBP15.39■□□□□ 0.05
COMMD4-221ENST00000567935 CHRNA3P32297 505 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 RFC2P35250 354 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 GPD2P43304 727 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 PDCLQ13371 301 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 DHX34Q14147 1143 aaKnown RBP15.39■□□□□ 0.05
COMMD4-221ENST00000567935 LPIN1Q14693 890 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 SOWAHAQ2M3V2 549 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 EMBQ6PCB8 327 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 BMP8AQ7Z5Y6 402 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 SLC13A5Q86YT5 568 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-221ENST00000567935 ZDHHC17Q8IUH5 632 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 KATNAL2Q8IYT4 538 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 TET1Q8NFU7 2136 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 DDX27Q96GQ7 796 aaKnown RBP15.39■□□□□ 0.05
COMMD4-221ENST00000567935 BTBD6Q96KE9 485 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 TGS1Q96RS0 853 aaKnown RBP15.39■□□□□ 0.05
COMMD4-221ENST00000567935 PRRX2Q99811 253 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 ACBD3Q9H3P7 528 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 GDF3Q9NR23 364 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 HOMER3Q9NSC5 361 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-221ENST00000567935 TSPAN16Q9UKR8 245 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 L1RE1Q9UN81 338 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 TANC1Q9C0D5 1861 aa15.39■□□□□ 0.05
COMMD4-221ENST00000567935 PLXNA3P51805 1871 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 KMT2EQ8IZD2 1858 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 ARHGEF37A1IGU5 675 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 A8MXQ7 604 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 PPEF2O14830 753 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 SART1O43290 800 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 PHF2O75151 1096 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 KRT37O76014 449 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 HEXIM1O94992 359 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 KRT3P12035 628 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 LILRA4P59901 499 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 RNASE9P60153 205 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 PSMC1P62191 440 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 DEFB103AP81534 67 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 NNTQ13423 1086 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 CUL1Q13616 776 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 CYP1B1Q16678 543 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 TMEM86AQ8N2M4 240 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 OR6B3Q8NGW1 331 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 EXD1Q8NHP7 514 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 EDAQ92838 391 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 PBXIP1Q96AQ6 731 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 MCRS1Q96EZ8 462 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 RBM41Q96IZ5 413 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 MRPL45Q9BRJ2 306 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 RAB17Q9H0T7 212 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 CXCL16Q9H2A7 254 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 AGO3Q9H9G7 860 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
COMMD4-221ENST00000567935 DMGDHQ9UI17 866 aaKnown RBP15.38■□□□□ 0.05
COMMD4-221ENST00000567935 TMEM221A6NGB7 291 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 M0R296 226 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 FSCN2O14926 492 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 INPPL1O15357 1258 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 BAIAP3O94812 1187 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 GHRP10912 638 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 PYGMP11217 842 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 DESP17661 470 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 CD52P31358 61 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 GBP1P32455 592 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 GNL1P36915 607 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-221ENST00000567935 SCNN1AP37088 669 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 MARCKSL1P49006 195 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 FNTAP49354 379 aa15.37■□□□□ 0.05
COMMD4-221ENST00000567935 COPS2P61201 443 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms