RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KNOP1Q1ED39 458 aaKnown RBP19.84■□□□□ 0.77
LINC01238-205ENST00000567549 BMT2Q1RMZ1 405 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 TRIM68Q6AZZ1 485 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 C11orf74Q86VG3 221 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 NELFCDQ8IXH7 590 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 SH3RF2Q8TEC5 729 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 CCDC47Q96A33 483 aaKnown RBP19.84■□□□□ 0.77
LINC01238-205ENST00000567549 PCED1BQ96HM7 432 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 TNIP3Q96KP6 325 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 TTLL2Q9BWV7 592 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 USP25Q9UHP3 1055 aa19.84■□□□□ 0.77
LINC01238-205ENST00000567549 GREB1Q4ZG55 1949 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 ANAPC1Q9H1A4 1944 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 A8MXQ7 604 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 RNF40O75150 1001 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 TADA3O75528 432 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 RTN3O95197 1032 aaPredicted RBP19.83■□□□□ 0.77
LINC01238-205ENST00000567549 ARSAP15289 507 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 LMO2P25791 158 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 BIRC3Q13489 604 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 MDH1BQ5I0G3 518 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 FSTL4Q6MZW2 842 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 ARL14EPQ8N8R7 260 aaPredicted RBP19.83■□□□□ 0.77
LINC01238-205ENST00000567549 C12orf50Q8NA57 414 aaPredicted RBP19.83■□□□□ 0.77
LINC01238-205ENST00000567549 SCFD1Q8WVM8 642 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 OVCA2Q8WZ82 227 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 CRTAC1Q9NQ79 661 aa19.83■□□□□ 0.77
LINC01238-205ENST00000567549 DCHS1Q96JQ0 3298 aa19.83■□□□□ 0.76
LINC01238-205ENST00000567549 HELZP42694 1942 aaKnown RBP19.82■□□□□ 0.76
LINC01238-205ENST00000567549 PTPRJQ12913 1337 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 SPAG17Q6Q759 2223 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 CLIC2O15247 247 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 TGFB1I1O43294 461 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 ATP2C2O75185 946 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 PTPN1P18031 435 aaKnown RBP19.82■□□□□ 0.76
LINC01238-205ENST00000567549 GALK1P51570 392 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 ATXN1P54253 815 aaKnown RBP19.82■□□□□ 0.76
LINC01238-205ENST00000567549 EHHADHQ08426 723 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 ELF2Q15723 593 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 PREPLQ4J6C6 727 aaPredicted RBP19.82■□□□□ 0.76
LINC01238-205ENST00000567549 RESP18Q5W5W9 173 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 PRR23CQ6ZRP0 262 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 SYT13Q7L8C5 426 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 FAM160A2Q8N612 972 aaPredicted RBP19.82■□□□□ 0.76
LINC01238-205ENST00000567549 GLIS3Q8NEA6 775 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 HPS3Q969F9 1004 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 CYP2S1Q96SQ9 504 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 GCNT4Q9P109 453 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 PCDHGA5Q9Y5G8 931 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 PTPRDP23468 1912 aa19.82■□□□□ 0.76
LINC01238-205ENST00000567549 APBB3O95704 486 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 SLFN14P0C7P3 912 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 TGM1P22735 817 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 HOXD13P35453 343 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 ZNF699Q32M78 642 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 EML3Q32P44 896 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 ZNF667Q5HYK9 610 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 B3GALNT2Q8NCR0 500 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 CCDC34Q96HJ3 373 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 VRTNQ9H8Y1 702 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 SLC39A2Q9NP94 309 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 TBC1D14Q9P2M4 693 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 PCDHA7Q9UN72 937 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 WNT6Q9Y6F9 365 aa19.81■□□□□ 0.76
LINC01238-205ENST00000567549 MED19A0JLT2 244 aaPredicted RBP19.8■□□□□ 0.76
LINC01238-205ENST00000567549 C2orf78A6NCI8 922 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 F8VP50 259 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 SLC30A4O14863 429 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 AXIN1O15169 862 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 RHOBTB1O94844 696 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 ABL1P00519 1130 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 EGFP01133 1207 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 AFMP43652 599 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 SLC7A9P82251 487 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 DMWDQ09019 674 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 WDR44Q5JSH3 913 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 NUDT18Q6ZVK8 323 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 RPLP0P6Q8NHW5 317 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 BLZF1Q9H2G9 400 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 PARD6AQ9NPB6 346 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 COMMD8Q9NX08 183 aa19.8■□□□□ 0.76
LINC01238-205ENST00000567549 NXF1Q9UBU9 619 aaKnown RBP19.8■□□□□ 0.76
LINC01238-205ENST00000567549 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 ZNF840PA6NDX5 716 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 ADH1CP00326 375 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 CST3P01034 146 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 RPN1P04843 607 aaKnown RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 EIF2DP41214 584 aaKnown RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 HSF5Q4G112 596 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 AASDHQ4L235 1098 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 FOXD4L5Q5VV16 416 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 IL31Q6EBC2 164 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 NUP93Q8N1F7 819 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 TMEM174Q8WUU8 243 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 FOXD4L4Q8WXT5 416 aaPredicted RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 TAF4BQ92750 862 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 OTUB2Q96DC9 234 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 MRPL45Q9BRJ2 306 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms