RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 RALGAPA1Q6GYQ0 2036 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 FOXD4L3Q6VB84 417 aaPredicted RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 DENND5BQ6ZUT9 1274 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 UNC13DQ70J99 1090 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 ARL14EPQ8N8R7 260 aaPredicted RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 SLC22A12Q96S37 553 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 CGRRF1Q99675 332 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 ECT2Q9H8V3 914 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 SEMA4GQ9NTN9 838 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 TRPM5Q9NZQ8 1165 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 CGNQ9P2M7 1197 aaKnown RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 GREB1Q4ZG55 1949 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 ANAPC1Q9H1A4 1944 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CCDC163A0A0D9SF12 145 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 C2orf78A6NCI8 922 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 RNF40O75150 1001 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 PHACTR2O75167 634 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 RPP40O75818 363 aaKnown RBP12.74□□□□□ -0.37
UBR1-206ENST00000566493 CST3P01034 146 aaPredicted RBP12.74□□□□□ -0.37
UBR1-206ENST00000566493 EGFP01133 1207 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 FAM163BP0C2L3 166 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 ZSCAN22P10073 491 aaPredicted RBP12.74□□□□□ -0.37
UBR1-206ENST00000566493 PFKLP17858 780 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 PPP3CCP48454 512 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 PSMD2Q13200 908 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CSRP2Q16527 193 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 WDR72Q3MJ13 1102 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CEP57L1Q8IYX8 460 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 FAM160A2Q8N612 972 aaPredicted RBP12.74□□□□□ -0.37
UBR1-206ENST00000566493 CCDC26Q8TAB7 109 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 RIN3Q8TB24 985 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 NETO1Q8TDF5 533 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 SH3RF2Q8TEC5 729 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 SCFD1Q8WVM8 642 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 GAB3Q8WWW8 586 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CD101Q93033 1021 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 SNX21Q969T3 373 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CHFRQ96EP1 664 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 MRPL45Q9BRJ2 306 aaKnown RBP12.74□□□□□ -0.37
UBR1-206ENST00000566493 BLZF1Q9H2G9 400 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
UBR1-206ENST00000566493 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
UBR1-206ENST00000566493 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.73□□□□□ -0.37
UBR1-206ENST00000566493 PVALEFA0A1B0GWK0 134 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 EXOC3O60645 756 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 TACC1O75410 805 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 NFATC1O95644 943 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 ABL1P00519 1130 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 AFMP43652 599 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 PXNP49023 591 aaPredicted RBP12.73□□□□□ -0.37
UBR1-206ENST00000566493 USP4Q13107 963 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 EML3Q32P44 896 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
UBR1-206ENST00000566493 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 PRR23CQ6ZRP0 262 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 GOLGA5Q8TBA6 731 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
UBR1-206ENST00000566493 C8orf48Q96LL4 319 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 FBRSL1Q9HCM7 1045 aaKnown RBP12.73□□□□□ -0.37
UBR1-206ENST00000566493 SLC39A2Q9NP94 309 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
UBR1-206ENST00000566493 ARHGAP26Q9UNA1 814 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 ATG2BQ96BY7 2078 aa12.73□□□□□ -0.37
UBR1-206ENST00000566493 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
UBR1-206ENST00000566493 DCDC2BA2VCK2 349 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 A8MXQ7 604 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 F8VP50 259 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 AXIN1O15169 862 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 F13A1P00488 732 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 TCF3P15923 654 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
UBR1-206ENST00000566493 CASP1P29466 404 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 HOXC13P31276 330 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 ATICP31939 592 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 USP46P62068 366 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
UBR1-206ENST00000566493 BIRC3Q13489 604 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 CUL4BQ13620 913 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 KNOP1Q1ED39 458 aaKnown RBP12.72□□□□□ -0.37
UBR1-206ENST00000566493 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 RESP18Q5W5W9 173 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 RPLP0P6Q8NHW5 317 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 ACDQ96AP0 544 aa12.72□□□□□ -0.37
UBR1-206ENST00000566493 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms