RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 DNM1Q05193 864 aaKnown RBP14.35□□□□□ -0.11
COMMD4-214ENST00000566230 NR1H3Q13133 447 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 COL9A2Q14055 689 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-214ENST00000566230 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 ANO7Q6IWH7 933 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 ZNF720Q7Z2F6 126 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 CYP2U1Q7Z449 544 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 NT5DC4Q86YG4 428 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 CCDC33Q8N5R6 958 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 C1orf127Q8N9H9 656 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 POMGNT1Q8WZA1 660 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 GATA6Q92908 595 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 STRA6Q9BX79 667 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 ADAM33Q9BZ11 813 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 STK17AQ9UEE5 414 aa14.35□□□□□ -0.11
COMMD4-214ENST00000566230 HUS1O60921 280 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 PPP1R37O75864 691 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 ITGB3P05106 788 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-214ENST00000566230 HDCP19113 662 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 TFAMQ00059 246 aaKnown RBP14.34□□□□□ -0.11
COMMD4-214ENST00000566230 KCNA1Q09470 495 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-214ENST00000566230 CFAP221Q4G0U5 840 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-214ENST00000566230 C11orf74Q86VG3 221 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 SFTPA1Q8IWL2 248 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 TMEM86AQ8N2M4 240 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 MDGA1Q8NFP4 955 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 OLIG1Q8TAK6 271 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
COMMD4-214ENST00000566230 CNOT6LQ96LI5 555 aaKnown RBP14.34□□□□□ -0.11
COMMD4-214ENST00000566230 SCNM1Q9BWG6 230 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 GDAP2Q9NXN4 497 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 MMP17Q9ULZ9 603 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 ARHGAP26Q9UNA1 814 aa14.34□□□□□ -0.11
COMMD4-214ENST00000566230 WDFY3Q8IZQ1 3526 aa14.33□□□□□ -0.11
COMMD4-214ENST00000566230 GABRDO14764 452 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 ATP2C2O75185 946 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 DHPSP49366 369 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-214ENST00000566230 KRT85P78386 507 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 MYL7Q01449 175 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 MESP2Q0VG99 397 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 POSTNQ15063 836 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 CRY1Q16526 586 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 UAP1L1Q3KQV9 507 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 FAM171BQ6P995 826 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 SV2BQ7L1I2 683 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-214ENST00000566230 BRSK2Q8IWQ3 736 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 SCN4BQ8IWT1 228 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 FRMD1Q8N878 549 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 DEFB124Q8NES8 71 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 PIGKQ92643 395 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 FAM213AQ9BRX8 229 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-214ENST00000566230 SIX4Q9UIU6 781 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 PCDHA7Q9UN72 937 aa14.33□□□□□ -0.12
COMMD4-214ENST00000566230 SRRM3A6NNA2 597 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-214ENST00000566230 NFATC1O95644 943 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 P2RY2P41231 377 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 MAGEA11P43364 429 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 ME1P48163 572 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 USP46P62068 366 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 KCNB1Q14721 858 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 SOWAHAQ2M3V2 549 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 ADGRF2Q8IZF7 708 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 CSGALNACT2Q8N6G5 542 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 RLN3Q8WXF3 142 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 HVCN1Q96D96 273 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 SAAL1Q96ER3 474 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 FUBP3Q96I24 572 aaKnown RBP eCLIP14.32□□□□□ -0.12
COMMD4-214ENST00000566230 FNBP1Q96RU3 617 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 PANK2Q9BZ23 570 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 LRRC27Q9C0I9 530 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 TMEM74BQ9NUR3 256 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 EVLQ9UI08 416 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-214ENST00000566230 SNX9Q9Y5X1 595 aa14.32□□□□□ -0.12
COMMD4-214ENST00000566230 TMEM8BA6NDV4 472 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 LEFTY2O00292 366 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 TULP1O00294 542 aaPredicted RBP14.31□□□□□ -0.12
COMMD4-214ENST00000566230 CYP17A1P05093 508 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 SLC6A11P48066 632 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 LHX1P48742 406 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 MRPS21P82921 87 aaKnown RBP14.31□□□□□ -0.12
COMMD4-214ENST00000566230 EMC10Q5UCC4 262 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 LIMS2Q7Z4I7 341 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 TTC30AQ86WT1 665 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 ADGRG2Q8IZP9 1017 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 ALLCQ8N6M5 410 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
COMMD4-214ENST00000566230 IQUBQ8NA54 791 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms