RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CHFRQ96EP1 664 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 FAM84AQ96KN4 292 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 MRPL45Q9BRJ2 306 aaKnown RBP16.18■□□□□ 0.18
CMTM3-212ENST00000566121 EXOC1Q9NV70 894 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 PTPRDP23468 1912 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 NCOR2Q9Y618 2525 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 OBSL1O75147 1896 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 ZNF840PA6NDX5 716 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 OTOL1A6NHN0 477 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 RTN3O95197 1032 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 RETP07949 1114 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 PDGFRBP09619 1106 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 P4HA1P13674 534 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 PFKFB1P16118 471 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 HDCP19113 662 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 ANXA13P27216 316 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 GRIK1P39086 918 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 MYL6P60660 151 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 SATB1Q01826 763 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 NR1H3Q13133 447 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 KCNB1Q14721 858 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 PON2Q15165 354 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 EML3Q32P44 896 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 KMT5BQ4FZB7 885 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 SDHAF4Q5VUM1 108 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 TDRD10Q5VZ19 366 aaKnown RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 TSSK4Q6SA08 328 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 WDR5BQ86VZ2 330 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 UNC93AQ86WB7 457 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 SCN4BQ8IWT1 228 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 CPA6Q8N4T0 437 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 B3GALNT2Q8NCR0 500 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 PLEKHO2Q8TD55 490 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 TNIP3Q96KP6 325 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 SPATA32Q96LK8 384 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 SMG9Q9H0W8 520 aaKnown RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 FAM124BQ9H5Z6 455 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-212ENST00000566121 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 NME7Q9Y5B8 376 aa16.17■□□□□ 0.18
CMTM3-212ENST00000566121 ANAPC1Q9H1A4 1944 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 LRRIQ3A6PVS8 624 aaPredicted RBP16.16■□□□□ 0.18
CMTM3-212ENST00000566121 HCRTO43612 131 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 AKAP3O75969 853 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 GJA4P35212 333 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 SYKP43405 635 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 NCOA4Q13772 614 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 GPIHBP1Q8IV16 184 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 GUF1Q8N442 669 aaKnown RBP16.16■□□□□ 0.18
CMTM3-212ENST00000566121 PDZD8Q8NEN9 1154 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 OR6B3Q8NGW1 331 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 LOXL4Q96JB6 756 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 SLC22A12Q96S37 553 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 CYP2S1Q96SQ9 504 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 EBF3Q9H4W6 596 aa16.16■□□□□ 0.18
CMTM3-212ENST00000566121 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 A0A0A0MRY4 1105 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 A0A1B0GVL5 298 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 A8MXQ7 604 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 F8VP50 259 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 SLC9A3R1O14745 358 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 VNN1O95497 513 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 ASS1P00966 412 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 OAS1P00973 400 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 NR3C1P04150 777 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 CKMP06732 381 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 TUBP50607 506 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 PSMC1P62191 440 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 CCDC142Q17RM4 750 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 FOXD4L6Q3SYB3 417 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 ZNF667Q5HYK9 610 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 MDH1BQ5I0G3 518 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 FSTL4Q6MZW2 842 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 FOXD4L3Q6VB84 417 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 NUP93Q8N1F7 819 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 CCDC47Q96A33 483 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 SLITRK1Q96PX8 696 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 CSNK1G1Q9HCP0 422 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 DUS2Q9NX74 493 aaKnown RBP16.15■□□□□ 0.18
CMTM3-212ENST00000566121 NCDNQ9UBB6 729 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 RAB23Q9ULC3 237 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 FRMD4BQ9Y2L6 1034 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 ATP8B3O60423 1300 aa16.15■□□□□ 0.18
CMTM3-212ENST00000566121 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 HRO43593 1189 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 PHACTR2O75167 634 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 NFATC1O95644 943 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 ZDHHC11BP0C7U3 371 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 EIF2DP41214 584 aaKnown RBP16.14■□□□□ 0.17
CMTM3-212ENST00000566121 GALK1P51570 392 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 USP46P62068 366 aa16.14■□□□□ 0.17
CMTM3-212ENST00000566121 LMNB2Q03252 620 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms