RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 DDX23Q9BUQ8 820 aaKnown RBP21.1■□□□□ 0.97
CMTM3-211ENST00000565922 TTLL2Q9BWV7 592 aa21.1■□□□□ 0.97
CMTM3-211ENST00000565922 APOBEC3GQ9HC16 384 aaKnown RBP21.1■□□□□ 0.97
CMTM3-211ENST00000565922 THG1LQ9NWX6 298 aaKnown RBP21.1■□□□□ 0.97
CMTM3-211ENST00000565922 COQ4Q9Y3A0 265 aa21.1■□□□□ 0.97
CMTM3-211ENST00000565922 SIT1Q9Y3P8 196 aa21.1■□□□□ 0.97
CMTM3-211ENST00000565922 TRAV19A0A0A6YYK7 116 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 MAN2B1O00754 1011 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 TADA3O75528 432 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 RTN3O95197 1032 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-211ENST00000565922 CETN1Q12798 172 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 ZNF268Q14587 947 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-211ENST00000565922 TXNDC8Q6A555 127 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 TPRG1Q6ZUI0 275 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 PJA1Q8NG27 643 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 SLC35C1Q96A29 364 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 OSBPL6Q9BZF3 934 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.09■□□□□ 0.97
CMTM3-211ENST00000565922 HEBP1Q9NRV9 189 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 TRPM5Q9NZQ8 1165 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 MUC6Q6W4X9 2439 aa21.09■□□□□ 0.97
CMTM3-211ENST00000565922 CLDN5O00501 218 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 NCAM2O15394 837 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 PRAMEF12O95522 483 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 USP17L7P0C7H9 530 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 GLULP15104 373 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 MLLT6P55198 1093 aaPredicted RBP21.08■□□□□ 0.97
CMTM3-211ENST00000565922 CBWD6Q4V339 395 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 CBWD3Q5JTY5 395 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 CBWD5Q5RIA9 395 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 ZNF852Q6ZMS4 543 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 CCDC105Q8IYK2 499 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 FUKQ8N0W3 1084 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 NUP93Q8N1F7 819 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 PDZD8Q8NEN9 1154 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 PRSS33Q8NF86 280 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 RSPRY1Q96DX4 576 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 DUSP9Q99956 384 aaKnown RBP21.08■□□□□ 0.97
CMTM3-211ENST00000565922 TRPC7Q9HCX4 862 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 KRT82Q9NSB4 513 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 TDP1Q9NUW8 608 aa21.08■□□□□ 0.97
CMTM3-211ENST00000565922 NCANO14594 1321 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 CILPO75339 1184 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 AP1G2O75843 785 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 CKMP06732 381 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 CD58P19256 250 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 MAGEA9P43362 315 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 YWHAEP62258 255 aaKnown RBP21.07■□□□□ 0.96
CMTM3-211ENST00000565922 SLC2A14Q8TDB8 520 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 OVCA2Q8WZ82 227 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 SEMA4DQ92854 862 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 CLSTN2Q9H4D0 955 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 LTB4R2Q9NPC1 389 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 COMMD8Q9NX08 183 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 HMGXB4Q9UGU5 601 aa21.07■□□□□ 0.96
CMTM3-211ENST00000565922 GOLGA6L22H0YM25 854 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 PMM2O15305 246 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 P4HA2O15460 535 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 PI15O43692 258 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 FAM200BP0CF97 657 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 CCDC192P0DO97 292 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 CCDC130P13994 396 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 FMO5P49326 533 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 CACNA2D1P54289 1103 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 UBXN2BQ14CS0 331 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 MLKLQ8NB16 471 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 USP13Q92995 863 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-211ENST00000565922 FOXQ1Q9C009 403 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 NUP62CLQ9H1M0 184 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 C8orf33Q9H7E9 229 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-211ENST00000565922 FAM49BQ9NUQ9 324 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 RWDD2AQ9UIY3 292 aa21.06■□□□□ 0.96
CMTM3-211ENST00000565922 ARNTLO00327 626 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 TBXAS1P24557 533 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-211ENST00000565922 YWHAQP27348 245 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 MARSP56192 900 aaKnown RBP21.05■□□□□ 0.96
CMTM3-211ENST00000565922 STX17P56962 302 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 USP46P62068 366 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 ORC1Q13415 861 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 CC2D1AQ6P1N0 951 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-211ENST00000565922 PAQR9Q6ZVX9 377 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 GPIHBP1Q8IV16 184 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 C12orf29Q8N999 325 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 DTWD2Q8NBA8 298 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 CYFIP2Q96F07 1278 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 IPO9Q96P70 1041 aaKnown RBP21.05■□□□□ 0.96
CMTM3-211ENST00000565922 KCNK16Q96T55 309 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 HNRNPABQ99729 332 aaKnown RBP21.05■□□□□ 0.96
CMTM3-211ENST00000565922 CSNK1G1Q9HCP0 422 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 CISHQ9NSE2 258 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 TMEM30AQ9NV96 361 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 PIAS3Q9Y6X2 628 aa21.05■□□□□ 0.96
CMTM3-211ENST00000565922 HDCP19113 662 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 KPNA1P52294 538 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-211ENST00000565922 SLC5A3P53794 718 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 NHLH1Q02575 133 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 TCF15Q12870 199 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 IFRD2Q12894 506 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-211ENST00000565922 TAF10Q12962 218 aa21.04■□□□□ 0.96
CMTM3-211ENST00000565922 FBXO32Q969P5 355 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms