RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TRAPPC10P48553 1259 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 HSPA7P48741 367 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 PXNP49023 591 aaPredicted RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 KRT17Q04695 432 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 DYRK1AQ13627 763 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 CYP2A13Q16696 494 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 SLC35G1Q2M3R5 365 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 BEAN1Q3B7T3 259 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 SPDYE7PQ495Y7 208 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 FAM83BQ5T0W9 1011 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 TMEM108Q6UXF1 575 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 TMPRSS9Q7Z410 1059 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 GAS2L3Q86XJ1 694 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 YAF2Q8IY57 180 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 CPEB3Q8NE35 698 aaKnown RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 SMG7Q92540 1137 aaKnown RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 ZC3H10Q96K80 434 aaKnown RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 PPP1R9BQ96SB3 815 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 CHMP4AQ9BY43 222 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 ALOXE3Q9BYJ1 711 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 WDR12Q9GZL7 423 aaKnown RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 AS3MTQ9HBK9 375 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 TRMT13Q9NUP7 481 aaKnown RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 ZSCAN32Q9NX65 697 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 SHOC2Q9UQ13 582 aa5.36□□□□□ -1.55
CHD9-215ENST00000565442 MRPS17Q9Y2R5 130 aaKnown RBP5.36□□□□□ -1.55
CHD9-215ENST00000565442 SETD1BQ9UPS6 1966 aaKnown RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 LOC102723971A0A1B0GUV8 181 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 A0A1W2PS29 197 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 PIPSLA2A3N6 862 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 PLEKHD1A6NEE1 506 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 UNC119BA6NIH7 251 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 MARCH11A6NNE9 402 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 F5H697 171 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 HLA-DOAP06340 250 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 DDX6P26196 483 aaKnown RBP eCLIP5.35□□□□□ -1.55
CHD9-215ENST00000565442 IL1R2P27930 398 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 BMPR1AP36894 532 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 NDUFV1P49821 464 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 ITGA8P53708 1063 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 RPS7P62081 194 aaKnown RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 GUCY1B3Q02153 619 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 TRIM14Q14142 442 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 SLC29A2Q14542 456 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 MPEG1Q2M385 716 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 ZIK1Q3SY52 487 aaPredicted RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 GORABQ5T7V8 394 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 BEND5Q7L4P6 421 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 KCTD20Q7Z5Y7 419 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 SRRM1Q8IYB3 904 aaKnown RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 ADGRG5Q8IZF4 528 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 FAM9AQ8IZU1 332 aaPredicted RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 SDR16C5Q8N3Y7 309 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.35□□□□□ -1.55
CHD9-215ENST00000565442 IPCEF1Q8WWN9 437 aaPredicted RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 ZNF566Q969W8 418 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 MYH16Q9H6N6 1097 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 MAN2B2Q9Y2E5 1009 aa5.35□□□□□ -1.55
CHD9-215ENST00000565442 ARHGEF17Q96PE2 2063 aaPredicted RBP5.35□□□□□ -1.55
CHD9-215ENST00000565442 E7ENX8 843 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 IFRD1O00458 451 aaPredicted RBP5.34□□□□□ -1.55
CHD9-215ENST00000565442 CDKL5O76039 1030 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 A1BGP04217 495 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 MYL4P12829 197 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 BTF3P20290 206 aaKnown RBP5.34□□□□□ -1.55
CHD9-215ENST00000565442 GATA3P23771 443 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 EEF1GP26641 437 aaKnown RBP5.34□□□□□ -1.55
CHD9-215ENST00000565442 ACVR2AP27037 513 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 NPTX2P47972 431 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 LOXL3P58215 753 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 BLOC1S1P78537 153 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 SATB1Q01826 763 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 TNFAIP2Q03169 654 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 TAP2Q03519 686 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 ARHGEF7Q14155 803 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 GRAMD1BQ3KR37 738 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 MGAT5BQ3V5L5 792 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 RBM20Q5T481 1227 aaKnown RBP5.34□□□□□ -1.55
CHD9-215ENST00000565442 GGT6Q6P531 493 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 CATSPERGQ6ZRH7 1159 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 MYLK4Q86YV6 388 aaPredicted RBP5.34□□□□□ -1.55
CHD9-215ENST00000565442 SYTL1Q8IYJ3 562 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 SNX19Q92543 992 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 BOD1Q96IK1 185 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 ADAM2Q99965 735 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 SELENOOQ9BVL4 669 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 PPCSQ9HAB8 311 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 GALNT9Q9HCQ5 603 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 ALG13Q9NP73 1137 aaKnown RBP5.34□□□□□ -1.55
CHD9-215ENST00000565442 TLK1Q9UKI8 766 aa5.34□□□□□ -1.55
CHD9-215ENST00000565442 COL3A1P02461 1466 aaPredicted RBP5.33□□□□□ -1.56
CHD9-215ENST00000565442 TRGV11A0A075B6L2 103 aa5.33□□□□□ -1.56
CHD9-215ENST00000565442 LOC102724159A0A0B4J2E5 919 aa5.33□□□□□ -1.56
CHD9-215ENST00000565442 AREL1O15033 823 aa5.33□□□□□ -1.56
CHD9-215ENST00000565442 EIF3JO75822 258 aaKnown RBP5.33□□□□□ -1.56
CHD9-215ENST00000565442 SOAT2O75908 522 aa5.33□□□□□ -1.56
CHD9-215ENST00000565442 ESRRBO95718 433 aa5.33□□□□□ -1.56
CHD9-215ENST00000565442 NDST3O95803 873 aa5.33□□□□□ -1.56
CHD9-215ENST00000565442 TPH1P17752 444 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms