RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 C8orf33Q9H7E9 229 aaPredicted RBP15.69■□□□□ 0.1
USB1-210ENST00000565151 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.69■□□□□ 0.11e-12■■■■■ 111.8
USB1-210ENST00000565151 POLR3BQ9NW08 1133 aaPredicted RBP15.69■□□□□ 0.1
USB1-210ENST00000565151 LAMA1P25391 3075 aa15.69■□□□□ 0.1
USB1-210ENST00000565151 SDK1Q7Z5N4 2213 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 SOBPA7XYQ1 873 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 K7ESF4 209 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 MYL1P05976 194 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 ATICP31939 592 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 AVPR1AP37288 418 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 GRIK1P39086 918 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 PGFP49763 221 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 TNNC1P63316 161 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 PPP3CAQ08209 521 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 USP4Q13107 963 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 RUNX3Q13761 415 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 ITPRIPL2Q3MIP1 535 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 CEP135Q66GS9 1140 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 FSTL4Q6MZW2 842 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 SCARA5Q6ZMJ2 495 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 SMYD4Q8IYR2 804 aaPredicted RBP15.68■□□□□ 0.1
USB1-210ENST00000565151 FMR1NBQ8N0W7 255 aaPredicted RBP15.68■□□□□ 0.1
USB1-210ENST00000565151 SYAP1Q96A49 352 aaPredicted RBP15.68■□□□□ 0.1
USB1-210ENST00000565151 C8orf48Q96LL4 319 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 KCNK16Q96T55 309 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 SCAND2PQ9GZW5 306 aaPredicted RBP15.68■□□□□ 0.1
USB1-210ENST00000565151 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 APOBEC3GQ9HC16 384 aaKnown RBP15.68■□□□□ 0.1
USB1-210ENST00000565151 TRPC7Q9HCX4 862 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 ZSCAN32Q9NX65 697 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 R3HCC1Q9Y3T6 440 aaKnown RBP15.68■□□□□ 0.1
USB1-210ENST00000565151 WNT6Q9Y6F9 365 aa15.68■□□□□ 0.1
USB1-210ENST00000565151 ZNF840PA6NDX5 716 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 A8MXQ7 604 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 TNFRSF10BO14763 440 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 PHACTR2O75167 634 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 BEST1O76090 585 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 TRIM49P0CI25 452 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 TRIM49CP0CI26 452 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 NOP14P78316 857 aaKnown RBP15.67■□□□□ 0.1
USB1-210ENST00000565151 PLCB2Q00722 1185 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 BIRC3Q13489 604 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 TRPC3Q13507 836 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 NFIL3Q16649 462 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 GAB4Q2WGN9 574 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 ZNF699Q32M78 642 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 FUKQ8N0W3 1084 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 ZMIZ2Q8NF64 920 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 TMC2Q8TDI7 906 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 ERCC4Q92889 916 aaPredicted RBP15.67■□□□□ 0.1
USB1-210ENST00000565151 EEF2KMTQ96G04 330 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 TWNKQ96RR1 684 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 LINC00597Q9H2U6 94 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 UXTQ9UBK9 157 aaPredicted RBP15.67■□□□□ 0.1
USB1-210ENST00000565151 PCDHGA2Q9Y5H1 932 aa15.67■□□□□ 0.1
USB1-210ENST00000565151 CEP250Q9BV73 2442 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 ASS1P00966 412 aaKnown RBP15.66■□□□□ 0.1
USB1-210ENST00000565151 ASPAP45381 313 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 MCCD1P59942 119 aaPredicted RBP15.66■□□□□ 0.1
USB1-210ENST00000565151 FAM160A1Q05DH4 1040 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 SRSF5Q13243 272 aaKnown RBP15.66■□□□□ 0.1
USB1-210ENST00000565151 PNOCQ13519 176 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 KCNB1Q14721 858 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 MTF1Q14872 753 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 MAPRE1Q15691 268 aaKnown RBP15.66■□□□□ 0.1
USB1-210ENST00000565151 EML3Q32P44 896 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 TMEM196Q5HYL7 178 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 DENND5BQ6ZUT9 1274 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 ACOT1Q86TX2 421 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 SPEM1Q8N4L4 309 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 ENGASEQ8NFI3 743 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 SCAMP5Q8TAC9 235 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 SH3RF2Q8TEC5 729 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 MSANTD3Q96H12 275 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 KIF9Q9HAQ2 790 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 ZMYM5Q9UJ78 669 aa15.66■□□□□ 0.1
USB1-210ENST00000565151 TRAV19A0A0A6YYK7 116 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 SCAMP3O14828 347 aaKnown RBP15.65■□□□□ 0.1
USB1-210ENST00000565151 HRO43593 1189 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 KINO60870 393 aaKnown RBP15.65■□□□□ 0.1
USB1-210ENST00000565151 OLFM2O95897 454 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 EGFP01133 1207 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 HLA-DRAP01903 254 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 CKMP06732 381 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 USP17L7P0C7H9 530 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 HDCP19113 662 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 TGM1P22735 817 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 NR2F2P24468 414 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 GJA4P35212 333 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 AP3M2P53677 418 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 TAF10Q12962 218 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 ZNF667Q5HYK9 610 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 ZC3H14Q6PJT7 736 aaKnown RBP15.65■□□□□ 0.1
USB1-210ENST00000565151 FAM35AQ86V20 835 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 GUF1Q8N442 669 aaKnown RBP15.65■□□□□ 0.1
USB1-210ENST00000565151 C12orf29Q8N999 325 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 TAS1R2Q8TE23 839 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 SMOQ99835 787 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 EPC1Q9H2F5 836 aa15.65■□□□□ 0.1
USB1-210ENST00000565151 THG1LQ9NWX6 298 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms