RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 ZACNQ401N2 412 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 SLC39A12Q504Y0 691 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 ANKRD40Q6AI12 368 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 CEP68Q76N32 757 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 METTL23Q86XA0 190 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 TMEM86AQ8N2M4 240 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 DDX1Q92499 740 aaKnown RBP20.21■□□□□ 0.83
NME3-207ENST00000564628 GCNAQ96QF7 691 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 TSG101Q99816 390 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 VRTNQ9H8Y1 702 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 SNX9Q9Y5X1 595 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 KIF26AQ9ULI4 1882 aaPredicted RBP20.2■□□□□ 0.82
NME3-207ENST00000564628 CCDC163A0A0D9SF12 145 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 TRIM49BA6NDI0 452 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 BIN1O00499 593 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 CETN3O15182 167 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 HUS1O60921 280 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 VAMP7P51809 220 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 FKBP3Q00688 224 aaKnown RBP20.2■□□□□ 0.82
NME3-207ENST00000564628 TNK2Q07912 1038 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 SOWAHAQ2M3V2 549 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 MGAT5BQ3V5L5 792 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 DPH6Q7L8W6 267 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 SPPL2BQ8TCT7 592 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 LOXL4Q96JB6 756 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 ANP32EQ9BTT0 268 aa20.2■□□□□ 0.82
NME3-207ENST00000564628 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
NME3-207ENST00000564628 PTPRDP23468 1912 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 SOBPA7XYQ1 873 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 GABRDO14764 452 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 SLC16A3O15427 465 aaKnown RBP20.19■□□□□ 0.82
NME3-207ENST00000564628 KRT37O76014 449 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 VNN1O95497 513 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 ATICP31939 592 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 MYL6P60660 151 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 CYP4F8P98187 520 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 TAF12Q16514 161 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 TTI2Q6NXR4 508 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 OSTM1Q86WC4 334 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 CMTM8Q8IZV2 173 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 THEM5Q8N1Q8 247 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 FAM83CQ9BQN1 747 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 SLC46A2Q9BY10 475 aa20.19■□□□□ 0.82
NME3-207ENST00000564628 GDF9O60383 454 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 ATG13O75143 517 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 TRIM49P0CI25 452 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 TRIM49CP0CI26 452 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 HAPLN1P10915 354 aaPredicted RBP20.18■□□□□ 0.82
NME3-207ENST00000564628 KRT13P13646 458 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 DDX6P26196 483 aaKnown RBP eCLIP20.18■□□□□ 0.82
NME3-207ENST00000564628 LIMK1P53667 647 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 BIRC3Q13489 604 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 NCOA4Q13772 614 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 TMEM196Q5HYL7 178 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 SV2AQ7L0J3 742 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 ADGRF2Q8IZF7 708 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 KBTBD7Q8WVZ9 684 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 GAB3Q8WWW8 586 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
NME3-207ENST00000564628 EEF2KMTQ96G04 330 aa20.18■□□□□ 0.82
NME3-207ENST00000564628 DUSP9Q99956 384 aaKnown RBP20.18■□□□□ 0.82
NME3-207ENST00000564628 RALGAPA1Q6GYQ0 2036 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 EPB41P11171 864 aaKnown RBP20.17■□□□□ 0.82
NME3-207ENST00000564628 AVPR1AP37288 418 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 PPP3CAQ08209 521 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 GRSF1Q12849 480 aaKnown RBP eCLIP20.17■□□□□ 0.82
NME3-207ENST00000564628 TRPC3Q13507 836 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 RUNX3Q13761 415 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 LRRTM3Q86VH5 581 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 PKMYT1Q99640 499 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 ACBD6Q9BR61 282 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 SMG9Q9H0W8 520 aaKnown RBP20.17■□□□□ 0.82
NME3-207ENST00000564628 NUP62CLQ9H1M0 184 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 KIF9Q9HAQ2 790 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 GKN1Q9NS71 199 aa20.17■□□□□ 0.82
NME3-207ENST00000564628 TRDMT1O14717 391 aaKnown RBP20.16■□□□□ 0.82
NME3-207ENST00000564628 PHACTR2O75167 634 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 TACC1O75410 805 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 RPP40O75818 363 aaKnown RBP20.16■□□□□ 0.82
NME3-207ENST00000564628 FAM163BP0C2L3 166 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 WARSP23381 471 aaKnown RBP20.16■□□□□ 0.82
NME3-207ENST00000564628 GTF2H1P32780 548 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 RAP1GAPP47736 663 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 LHX1P48742 406 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 NLRP12P59046 1061 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 AMPD2Q01433 879 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 KLHL40Q2TBA0 621 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 KLHL10Q6JEL2 608 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 CACNA2D4Q7Z3S7 1137 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 TMEM150AQ86TG1 271 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 DCP1BQ8IZD4 617 aaKnown RBP20.16■□□□□ 0.82
NME3-207ENST00000564628 GIPC2Q8TF65 315 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 CEP63Q96MT8 703 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 HPS4Q9NQG7 708 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 DDX43Q9NXZ2 648 aaKnown RBP20.16■□□□□ 0.82
NME3-207ENST00000564628 CTNND2Q9UQB3 1225 aa20.16■□□□□ 0.82
NME3-207ENST00000564628 GREB1Q4ZG55 1949 aa20.15■□□□□ 0.82
NME3-207ENST00000564628 BICDL2A1A5D9 508 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms