RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ZMYND8Q9ULU4 1186 aaPredicted RBP5.55□□□□□ -1.52
LINC00560-201ENST00000564593 UNC119BA6NIH7 251 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 LGALS16A8MUM7 142 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 COQ9O75208 318 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 NR4A1P22736 598 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 ZFP36P26651 326 aaKnown RBP5.54□□□□□ -1.52
LINC00560-201ENST00000564593 GRK6P43250 576 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 MAGEA10P43363 369 aaPredicted RBP5.54□□□□□ -1.52
LINC00560-201ENST00000564593 GALNT1Q10472 559 aaPredicted RBP5.54□□□□□ -1.52
LINC00560-201ENST00000564593 SPARCL1Q14515 664 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 FAXCQ5TGI0 409 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 TLDC1Q6P9B6 456 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 SPATA5Q8NB90 893 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 MYRIPQ8NFW9 859 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 DNAJB14Q8TBM8 379 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 ZNF384Q8TF68 577 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 FAM136AQ96C01 138 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 MYEOVQ96EZ4 313 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 SCLT1Q96NL6 688 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 PLEKHG4BQ96PX9 1271 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 ADAM2Q99965 735 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 TPSD1Q9BZJ3 242 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 TRIM5Q9C035 493 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 AMBRA1Q9C0C7 1298 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 LRFN1Q9P244 771 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 SERTAD3Q9UJW9 196 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 HPSEQ9Y251 543 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 SSX2IPQ9Y2D8 614 aa5.54□□□□□ -1.52
LINC00560-201ENST00000564593 NPC1O15118 1278 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 EGR1P18146 543 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 PRKAR1BP31321 381 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
LINC00560-201ENST00000564593 MAPKAPK3Q16644 382 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 TIGD2Q4W5G0 525 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.53□□□□□ -1.52
LINC00560-201ENST00000564593 RAP1GAP2Q684P5 730 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 MZT2AQ6P582 158 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 KRT73Q86Y46 540 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 FAM109AQ8N4B1 249 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 SLC30A5Q8TAD4 765 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 TMEM171Q8WVE6 324 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 PTCD3Q96EY7 689 aaKnown RBP5.53□□□□□ -1.52
LINC00560-201ENST00000564593 RMDN3Q96TC7 470 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 MYLK2Q9H1R3 596 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 ZBTB26Q9HCK0 441 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 AGO4Q9HCK5 861 aaKnown RBP5.53□□□□□ -1.52
LINC00560-201ENST00000564593 IGSF9Q9P2J2 1179 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 MYRFQ9Y2G1 1151 aa5.53□□□□□ -1.52
LINC00560-201ENST00000564593 TMEM200CA6NKL6 621 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 AQP12BA6NM10 295 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 PIP5K1BO14986 540 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 SPDEFO95238 335 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 CSF1RP07333 972 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 INSRRP14616 1297 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 ZNF20P17024 532 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 GUCY1B3Q02153 619 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 RAPGEF1Q13905 1077 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 CCNIQ14094 377 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 PTK2BQ14289 1009 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 PUM1Q14671 1186 aaKnown RBP eCLIP5.52□□□□□ -1.53
LINC00560-201ENST00000564593 CDSNQ15517 529 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 ARHGAP15Q53QZ3 475 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 MANEALQ5VSG8 457 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 ARL6IP4Q66PJ3 421 aaKnown RBP5.52□□□□□ -1.53
LINC00560-201ENST00000564593 MRNIPQ6NTE8 343 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 RNF207Q6ZRF8 634 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 ACTRT3Q9BYD9 372 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 SLC25A32Q9H2D1 315 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 DACT1Q9NYF0 836 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 DKK2Q9UBU2 259 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 TSC22D4Q9Y3Q8 395 aa5.52□□□□□ -1.53
LINC00560-201ENST00000564593 CD3EAPO15446 510 aaKnown RBP5.51□□□□□ -1.53
LINC00560-201ENST00000564593 SUV39H1O43463 412 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 PPFIA4O75335 1185 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 C1SP09871 688 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 PPP3CBP16298 524 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 ADORA2AP29274 412 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 PDE6CP51160 858 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 FSTL1Q12841 308 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 TP53BP2Q13625 1128 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 CERCAMQ5T4B2 595 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 TMTC4Q5T4D3 741 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 CACNA2D3Q8IZS8 1091 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 CPXCR1Q8N123 301 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 SYNE4Q8N205 404 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 B3GALNT2Q8NCR0 500 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 FAM71BQ8TC56 605 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 PPM1EQ8WY54 764 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 TRIM63Q969Q1 353 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 ZNF668Q96K58 619 aaPredicted RBP5.51□□□□□ -1.53
LINC00560-201ENST00000564593 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 PAGR1Q9BTK6 254 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 C1QTNF3Q9BXJ4 246 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 TBCCD1Q9NVR7 557 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 TMOD4Q9NZQ9 345 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 LUZP4Q9P127 313 aa5.51□□□□□ -1.53
LINC00560-201ENST00000564593 DNAJB11Q9UBS4 358 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms