RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF252P-AS1Q0IIN9 211 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 CYP1B1Q16678 543 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 CCNI2Q6ZMN8 369 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-210ENST00000564587 SLC26A9Q7LBE3 791 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 COLGALT2Q8IYK4 626 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 FUKQ8N0W3 1084 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 JOSD2Q8TAC2 188 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 TBC1D13Q9NVG8 400 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-210ENST00000564587 RASAL2Q9UJF2 1139 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 EFR3BQ9Y2G0 817 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 TANC1Q9C0D5 1861 aa16.35■□□□□ 0.21
COMMD4-210ENST00000564587 C2CD4BA6NLJ0 364 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 F8VP50 259 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 FBXO21O94952 628 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 GLI1P08151 1106 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 PDGFRAP16234 1089 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 GJA8P48165 433 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 FNTAP49354 379 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-210ENST00000564587 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-210ENST00000564587 TSPY1Q01534 308 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 TLE2Q04725 743 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 FAAP100Q0VG06 881 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
COMMD4-210ENST00000564587 GPNMBQ14956 572 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 MDH1BQ5I0G3 518 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 OVOS1Q6IE37 1185 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 CD300LGQ6UXG3 332 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 CPNE8Q86YQ8 564 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 NPAS4Q8IUM7 802 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 CCDC50Q8IVM0 306 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-210ENST00000564587 COLEC11Q9BWP8 271 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 RAB17Q9H0T7 212 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 LRRC4Q9HBW1 653 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 TJP2Q9UDY2 1190 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 PCYOX1Q9UHG3 505 aa16.34■□□□□ 0.21
COMMD4-210ENST00000564587 SYN3O14994 580 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 PAPSS1O43252 624 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 RAD51CO43502 376 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 HEXIM1O94992 359 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 KRT1P04264 644 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 SDC4P31431 198 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 GBP1P32455 592 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 PTPN9P43378 593 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 CUL1Q13616 776 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 INTS6LQ5JSJ4 861 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 FAM171BQ6P995 826 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 PIGZQ86VD9 579 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 RXFP2Q8WXD0 754 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 MAGOHBQ96A72 148 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 PAAF1Q9BRP4 392 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 TMEM175Q9BSA9 504 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 B3GNT5Q9BYG0 378 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 OSBPL8Q9BZF1 889 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 DDX47Q9H0S4 455 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 CRTAC1Q9NQ79 661 aa16.33■□□□□ 0.2
COMMD4-210ENST00000564587 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 UTP11Q9Y3A2 253 aaKnown RBP16.33■□□□□ 0.2
COMMD4-210ENST00000564587 HCRTO43612 131 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 HSF2BPO75031 334 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 ATP2C2O75185 946 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 LRCH4O75427 683 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 DDHD2O94830 711 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TJP3O95049 919 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TKTP29401 623 aaKnown RBP16.32■□□□□ 0.2
COMMD4-210ENST00000564587 BRCC3P46736 316 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 OR1G1P47890 313 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TTC3P53804 2025 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 ELAVL2Q12926 359 aaKnown RBP16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 BOLA3Q53S33 107 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 BEND6Q5SZJ8 279 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-210ENST00000564587 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 C4orf50Q6ZRC1 276 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 PAQR9Q6ZVX9 377 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 FAM35AQ86V20 835 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 EMC1Q8N766 993 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 PRELID2Q8N945 189 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 GRK7Q8WTQ7 553 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TBCBQ99426 244 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 OXCT2Q9BYC2 517 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-210ENST00000564587 FRMD8P1Q9BZ68 369 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-210ENST00000564587 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 CACNG4Q9UBN1 327 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TBX21Q9UL17 535 aa16.32■□□□□ 0.2
COMMD4-210ENST00000564587 TIMM13Q9Y5L4 95 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-210ENST00000564587 MYBPHLA2RUH7 354 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 CARNS1A5YM72 827 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 TULP2O00295 520 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 TADA2AO75478 443 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 AP1G2O75843 785 aa16.31■□□□□ 0.2
COMMD4-210ENST00000564587 OAZ2O95190 189 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms