RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 SMC2O95347 1197 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 KRT13P13646 458 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 CCNE1P24864 410 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 ANXA13P27216 316 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 AVPR1AP37288 418 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 MCCD1P59942 119 aaPredicted RBP13.5□□□□□ -0.25
HERC2-206ENST00000564519 RSPO4Q2I0M5 234 aaPredicted RBP13.5□□□□□ -0.25
HERC2-206ENST00000564519 ARHGAP29Q52LW3 1261 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 COBLL1Q53SF7 1204 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 WDR44Q5JSH3 913 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 ANKRD40Q6AI12 368 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 TRIM68Q6AZZ1 485 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 TXNDC11Q6PKC3 985 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 CSGALNACT1Q8TDX6 532 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 FAM3CQ92520 227 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 CLDN23Q96B33 292 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 C8orf48Q96LL4 319 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 RAB23Q9ULC3 237 aa13.5□□□□□ -0.25
HERC2-206ENST00000564519 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 MED19A0JLT2 244 aaPredicted RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 OTOL1A6NHN0 477 aaPredicted RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 MAN2B1O00754 1011 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 CETN3O15182 167 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 CCDC130P13994 396 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 KPNA1P52294 538 aaPredicted RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 NDST1P52848 882 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 IFRD2Q12894 506 aaPredicted RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 ZC3H3Q8IXZ2 948 aaKnown RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 ARL14EPQ8N8R7 260 aaPredicted RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 SUMF1Q8NBK3 374 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 TAF4BQ92750 862 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 SEMA4DQ92854 862 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 FAM83CQ9BQN1 747 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 TTLL2Q9BWV7 592 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 ELOVL4Q9GZR5 314 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 TMEM8AQ9HCN3 771 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 TDP1Q9NUW8 608 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 ZMYM5Q9UJ78 669 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 GMEB2Q9UKD1 530 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 USP18Q9UMW8 372 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 RIF1Q5UIP0 2472 aaKnown RBP13.49□□□□□ -0.25
HERC2-206ENST00000564519 FAM186AA6NE01 2351 aa13.49□□□□□ -0.25
HERC2-206ENST00000564519 TRAV19A0A0A6YYK7 116 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 ZNF840PA6NDX5 716 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 SOBPA7XYQ1 873 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 EPB41P11171 864 aaKnown RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 P4HA1P13674 534 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 ARSAP15289 507 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 BMP6P22004 513 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 CTHP32929 405 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 RPS9P46781 194 aaKnown RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 NRLP54845 237 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 NOP14P78316 857 aaKnown RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 ZXDBP98169 803 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 ENPEPQ07075 957 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 TAF10Q12962 218 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 ZNF268Q14587 947 aaPredicted RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 FAM35AQ86V20 835 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 ELOA2Q8IYF1 753 aaPredicted RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 C12orf29Q8N999 325 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 CHFRQ96EP1 664 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 MED10Q9BTT4 135 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 EBF3Q9H4W6 596 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 LMAN1LQ9HAT1 526 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 GKN1Q9NS71 199 aa13.48□□□□□ -0.25
HERC2-206ENST00000564519 RBM12Q9NTZ6 932 aaKnown RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 SMG5Q9UPR3 1016 aaKnown RBP13.48□□□□□ -0.25
HERC2-206ENST00000564519 PRR5-ARHGAP8B1AHC4 643 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 BEST1O76090 585 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CKMP06732 381 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 USP17L7P0C7H9 530 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CHRNB1P11230 501 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CD58P19256 250 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 GTF2H1P32780 548 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
HERC2-206ENST00000564519 ARHGAP8P85298 464 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 LMNB2Q03252 620 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 MTAPQ13126 283 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 MTF1Q14872 753 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 ZNF77Q15935 545 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CBWD6Q4V339 395 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CBWD3Q5JTY5 395 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CBWD5Q5RIA9 395 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 KRT39Q6A163 491 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 TSSK4Q6SA08 328 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 CRYBG2Q8N1P7 616 aa13.47□□□□□ -0.25
HERC2-206ENST00000564519 TTC16Q8NEE8 873 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms