RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CCDC68Q9H2F9 335 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 SLC17A7Q9P2U7 560 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 CAMTA1Q9Y6Y1 1673 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 FGRP09769 529 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 STIP1P31948 543 aaKnown RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 CIITAP33076 1130 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 FMO1Q01740 532 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 VSTM1Q6UX27 236 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 CDR2LQ86X02 465 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 ZMYND8Q9ULU4 1186 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 AKT3Q9Y243 479 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 STRNO43815 780 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 PEX1O43933 1283 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 ECE2O60344 883 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 DGAT1O75907 488 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 PSMC3P17980 439 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 ADARP55265 1226 aaKnown RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 SURF1Q15526 300 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 Q4G0T1 1027 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 RFWD3Q6PCD5 774 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 SLFN11Q7Z7L1 901 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 ZNF786Q8N393 782 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 KCNMB3Q9NPA1 279 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 HNRNPRO43390 633 aaKnown RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 DCXO43602 365 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 WFS1O76024 890 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ASNSP08243 561 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ABCD1P33897 745 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 PTGIRP43119 386 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 PLOD1Q02809 727 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 C16orf72Q14CZ0 275 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 CCDC92Q53HC0 331 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 C16orf89Q6UX73 402 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 NCAPG2Q86XI2 1143 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 BTBD7Q9P203 1132 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 KDM1AO60341 852 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ZMPSTE24O75844 475 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 GABPAQ06546 454 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 TBCCQ15814 346 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 KLC3Q6P597 504 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 MYLK4Q86YV6 388 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 UBA3Q8TBC4 463 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 SGF29Q96ES7 293 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ZMAT2Q96NC0 199 aaKnown RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 NMUR2Q9GZQ4 415 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 CDY2AQ9Y6F7 541 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 CDY1Q9Y6F8 540 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 BST1Q10588 318 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 FASTKD3Q14CZ7 662 aaKnown RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ANO7Q6IWH7 933 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 C16orf46Q6P387 395 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 FAM43BQ6ZT52 329 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 CATSPER2Q96P56 530 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ECSITQ9BQ95 431 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 IL1RL2Q9HB29 575 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 LRRC4CQ9HCJ2 640 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 RNF146Q9NTX7 359 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
COMMD4-209ENST00000564068 TSC22D4Q9Y3Q8 395 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
COMMD4-209ENST00000564068 MMP14P50281 582 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ACAP1Q15027 740 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 DENND5BQ6ZUT9 1274 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 FAM228AQ86W67 206 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 TMEM109Q9BVC6 243 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 GCOM2Q9BZD3 368 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 FEM1BQ9UK73 627 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 MYH8P13535 1937 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 WDR4P57081 412 aaKnown RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 TNFAIP1Q13829 316 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ABRAQ8N0Z2 381 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 GSTCDQ8NEC7 633 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 MECRQ9BV79 373 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms