RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 NBEAL2Q6ZNJ1 2754 aa11.68□□□□□ -0.54
HDGFL3-204ENST00000563790 CYP26A1O43174 497 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 ARF4P18085 180 aaPredicted RBP11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 NTSR1P30989 418 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 TNFSF9P41273 254 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 NOLC1Q14978 699 aaKnown RBP eCLIP11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 SHBQ15464 509 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 SLC27A1Q6PCB7 646 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 LAYNQ6UX15 382 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 PIBF1Q8WXW3 757 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 UROC1Q96N76 676 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 SLC6A17Q9H1V8 727 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 LINC00597Q9H2U6 94 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 USP36Q9P275 1121 aaKnown RBP11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
HDGFL3-204ENST00000563790 RAB11FIP3O75154 756 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 NPTXRO95502 500 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 NADKO95544 446 aaPredicted RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 SLC6A11P48066 632 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 IFIT1BQ5T764 474 aaKnown RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 TMEM150AQ86TG1 271 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 ARL14Q8N4G2 192 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 C9orf43Q8TAL5 461 aaPredicted RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 PRPF31Q8WWY3 499 aaKnown RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 ELF4Q99607 663 aaPredicted RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 PCED1AQ9H1Q7 454 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 ZNF71Q9NQZ8 489 aaPredicted RBP11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 ARHGEF4Q9NR80 690 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
HDGFL3-204ENST00000563790 TMEM150BA6NC51 233 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 YKT6O15498 198 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 TRAK2O60296 914 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 OPA1O60313 960 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 C4BPAP04003 597 aaKnown RBP11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 RLBP1P12271 317 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 LAMTOR4Q0VGL1 99 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 KLRB1Q12918 225 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 ORC1Q13415 861 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 AMHR2Q16671 573 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 CENPPQ6IPU0 288 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 KIAA1324Q6UXG2 1013 aaKnown RBP11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 PLA2G4DQ86XP0 818 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 PDCD6IPQ8WUM4 868 aaKnown RBP11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 TCTN2Q96GX1 697 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 SH2D3AQ9BRG2 576 aa11.65□□□□□ -0.54
HDGFL3-204ENST00000563790 MN1Q10571 1320 aaPredicted RBP11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 KCNJ18B7U540 433 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 TBX3O15119 743 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 STBD1O95210 358 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 SLC6A4P31645 630 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 TGIF1Q15583 401 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 ISXQ2M1V0 245 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 XKR3Q5GH77 459 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 TXNDC8Q6A555 127 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 MON1AQ86VX9 555 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 PHTF2Q8N3S3 785 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 GRAMD1AQ96CP6 724 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 ZNF577Q9BSK1 485 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 ZSWIM6Q9HCJ5 1215 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 DISC1Q9NRI5 854 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 ZSWIM5Q9P217 1185 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 HCN2Q9UL51 889 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 VPS13CQ709C8 3753 aa11.64□□□□□ -0.55
HDGFL3-204ENST00000563790 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 BTBD18B2RXH4 712 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 FAM86B1E9PN63 330 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 CYP17A1P05093 508 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 EPHA8P29322 1005 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 OXTRP30559 389 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 WASP42768 502 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 TAOK1Q7L7X3 1001 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 CDR2LQ86X02 465 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 TTC9BQ8N6N2 239 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 EFCAB3Q8N7B9 438 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 SNX19Q92543 992 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 PPP1R10Q96QC0 940 aaKnown RBP11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 ERRFI1Q9UJM3 462 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 ACSL6Q9UKU0 697 aa11.63□□□□□ -0.55
HDGFL3-204ENST00000563790 TMEM200CA6NKL6 621 aa11.62□□□□□ -0.55
HDGFL3-204ENST00000563790 TSPAN3O60637 253 aa11.62□□□□□ -0.55
HDGFL3-204ENST00000563790 SOAT2O75908 522 aa11.62□□□□□ -0.55
HDGFL3-204ENST00000563790 IGLV3-19P01714 112 aa11.62□□□□□ -0.55
HDGFL3-204ENST00000563790 F11P03951 625 aa11.62□□□□□ -0.55
HDGFL3-204ENST00000563790 ITGA2BP08514 1039 aa11.62□□□□□ -0.55
HDGFL3-204ENST00000563790 WT1P19544 449 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms