RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OASLQ15646 514 aaKnown RBP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 TAZQ16635 292 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 ZSCAN26Q16670 478 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 DRICH1Q6PGQ1 229 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 OLFML1Q6UWY5 402 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 LEKR1Q6ZMV7 388 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 CYP4V2Q6ZWL3 525 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 SLC35F5Q8WV83 523 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 SLC4A5Q9BY07 1137 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 CACNG4Q9UBN1 327 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 ANAPC5Q9UJX4 755 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 NOVA2Q9UNW9 492 aaKnown RBP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 ZNF148Q9UQR1 794 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 HTTP42858 3142 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 CEP350Q5VT06 3117 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 PDGFRAP16234 1089 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 CDO1Q16878 200 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 AGBL2Q5U5Z8 902 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 EMC10Q5UCC4 262 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 IZUMO3Q5VZ72 239 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 ALLCQ8N6M5 410 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 CCDC89Q8N998 374 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 KHSRPQ92945 711 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 ZNF560Q96MR9 790 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 TRAIPQ9BWF2 469 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 B3GNT5Q9BYG0 378 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 ASNSD1Q9NWL6 643 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 PAPSS1O43252 624 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-203ENST00000563226 RNF8O76064 485 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 ADORA2BP29275 332 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 TAF6P49848 677 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 VCPP55072 806 aaKnown RBP20.06■□□□□ 0.8
SMPD3-203ENST00000563226 PRKCZQ05513 592 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 CCDC142Q17RM4 750 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 P3H1Q32P28 736 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 FAM47CQ5HY64 1035 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 MFSD14CQ5VZR4 134 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 ARHGAP17Q68EM7 881 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 FOXR1Q6PIV2 292 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 SCUBE3Q8IX30 993 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 CFAP57Q96MR6 1250 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 CNPY3Q9BT09 278 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 OSBPL7Q9BZF2 842 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 ZMYND15Q9H091 742 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 UPF3AQ9H1J1 476 aaKnown RBP20.06■□□□□ 0.8
SMPD3-203ENST00000563226 C10orf88Q9H8K7 445 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 TRPV2Q9Y5S1 764 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 CST8O60676 142 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 GNL1P36915 607 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-203ENST00000563226 HNRNPH2P55795 449 aaKnown RBP20.06■□□□□ 0.8
SMPD3-203ENST00000563226 GUCY1A3Q02108 690 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 CCDC14Q49A88 953 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 LIMS2Q7Z4I7 341 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 TMEM110Q86TL2 294 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 OSTM1Q86WC4 334 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 CMASQ8NFW8 434 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-203ENST00000563226 SLC35B2Q8TB61 432 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 TMEM121Q9BTD3 319 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 HESX1Q9UBX0 185 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 ST3GAL5Q9UNP4 418 aa20.06■□□□□ 0.8
SMPD3-203ENST00000563226 SMIM23A6NLE4 172 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 XPOTO43592 962 aaKnown RBP20.05■□□□□ 0.8
SMPD3-203ENST00000563226 KPNA6O60684 536 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 CHRNA1P02708 482 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 PCK1P35558 622 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 AFF1P51825 1210 aaKnown RBP20.05■□□□□ 0.8
SMPD3-203ENST00000563226 ATP11AP98196 1134 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 OTUD4Q01804 1114 aaKnown RBP20.05■□□□□ 0.8
SMPD3-203ENST00000563226 ACAP1Q15027 740 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 BBS12Q6ZW61 710 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 KCTD6Q8NC69 237 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 ACTL9Q8TC94 416 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 EPS8L3Q8TE67 593 aaKnown RBP20.05■□□□□ 0.8
SMPD3-203ENST00000563226 CLEC4CQ8WTT0 213 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 NKD2Q969F2 451 aaPredicted RBP20.05■□□□□ 0.8
SMPD3-203ENST00000563226 MIS12Q9H081 205 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 ADAM7Q9H2U9 754 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 RABEP2Q9H5N1 569 aa20.05■□□□□ 0.8
SMPD3-203ENST00000563226 EIF3HO15372 352 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 ACSL3O95573 720 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 SETSIPP0DME0 302 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 PNPLA4P41247 253 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 ARSEP51690 589 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 LILRA4P59901 499 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 MAGOHP61326 146 aaKnown RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 MMRN1Q13201 1228 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 HIBCHQ6NVY1 386 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 CRYBG2Q8N1P7 616 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 APPL2Q8NEU8 664 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 PPP1R10Q96QC0 940 aaKnown RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 SNX25Q9H3E2 840 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 DRG1Q9Y295 367 aaKnown RBP20.04■□□□□ 0.8
SMPD3-203ENST00000563226 EFR3BQ9Y2G0 817 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 TLDC2A0PJX2 215 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 M0QZ92 97 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 ADAMTS4O75173 837 aa20.04■□□□□ 0.8
SMPD3-203ENST00000563226 MYCNP04198 464 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms