RNA–Protein interactions for RNA: ENST00000563155.1

PARN-208, Transcript of poly(A)-specific ribonuclease, human

TSL 2

Gene PARN, Length 335 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PARN-208	ENST00000563155	PNKP	Q96T60	521 aa		4.63	□□□□□ -1.67
PARN-208	ENST00000563155	TM7SF3	Q9NS93	570 aa		4.63	□□□□□ -1.67
PARN-208	ENST00000563155	DNMT3B	Q9UBC3	853 aa	Known RBP	4.63	□□□□□ -1.67
PARN-208	ENST00000563155	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.63	□□□□□ -1.67
PARN-208	ENST00000563155	TOR1B	O14657	336 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	FOXN1	O15353	648 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	RASAL1	O95294	804 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	GPANK1	O95872	356 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	SERPINF1	P36955	418 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	FAM189B	P81408	668 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CCDC142	Q17RM4	750 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CD300E	Q496F6	205 aa	Predicted RBP	4.62	□□□□□ -1.67
PARN-208	ENST00000563155	SULT6B1	Q6IMI4	303 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	LAYN	Q6UX15	382 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	ZNF627	Q7L945	461 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	KRT28	Q7Z3Y7	464 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CCDC28A	Q8IWP9	274 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	ANKRD35	Q8N283	1001 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
PARN-208	ENST00000563155		Q8NA96	180 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	FAM71B	Q8TC56	605 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	ISCA1	Q9BUE6	129 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	TMEM120A	Q9BXJ8	343 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	REXO4	Q9GZR2	422 aa	Known RBP	4.62	□□□□□ -1.67
PARN-208	ENST00000563155	ZNF768	Q9H5H4	540 aa	Known RBP	4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CXorf36	Q9H7Y0	433 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	XPNPEP3	Q9NQH7	507 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.62	□□□□□ -1.67
PARN-208	ENST00000563155	TRPM5	Q9NZQ8	1165 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CEP72	Q9P209	647 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	DKK4	Q9UBT3	224 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	EIF2B4	Q9UI10	523 aa	Known RBP	4.62	□□□□□ -1.67
PARN-208	ENST00000563155	SORCS3	Q9UPU3	1222 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	MAP3K2	Q9Y2U5	619 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CHST2	Q9Y4C5	530 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	CDY1	Q9Y6F8	540 aa		4.62	□□□□□ -1.67
PARN-208	ENST00000563155	GRXCR1	A8MXD5	290 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	AHRR	A9YTQ3	701 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	IPO5	O00410	1097 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	KCNQ3	O43525	872 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	SRGAP2	O75044	1071 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	ERN1	O75460	977 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	RPS6KA4	O75676	772 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	PIAS2	O75928	621 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	USP1	O94782	785 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	LMNA	P02545	664 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	ATXN1L	P0C7T5	689 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	DHRS4L1	P0CG22	281 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	CYP2C9	P11712	490 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	XRCC6	P12956	609 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	GYS1	P13807	737 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	KCNA2	P16389	499 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	KCNA3	P22001	575 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MAPK9	P45984	424 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	PXN	P49023	591 aa	Predicted RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MAN2A2	P49641	1150 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MYO1E	Q12965	1108 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	PRKG1	Q13976	671 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	PTK2B	Q14289	1009 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MGAT5B	Q3V5L5	792 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	VPS53	Q5VIR6	699 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	NAIF1	Q69YI7	327 aa	Predicted RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	HTR3D	Q70Z44	454 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	TMPRSS9	Q7Z410	1059 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MAPKAPK5	Q8IW41	473 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	DNAJB14	Q8TBM8	379 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	STT3B	Q8TCJ2	826 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	TMEM171	Q8WVE6	324 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	TRAPPC12	Q8WVT3	735 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	PPP2R3C	Q969Q6	453 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	RILPL2	Q969X0	211 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	TMEM125	Q96AQ2	219 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	LTV1	Q96GA3	475 aa	Predicted RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MOGAT1	Q96PD6	335 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	PRPF18	Q99633	342 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	SLC46A2	Q9BY10	475 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	EIF2A	Q9BY44	585 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	RNPEP	Q9H4A4	650 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MLXIP	Q9HAP2	919 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	ZSCAN32	Q9NX65	697 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	RRN3	Q9NYV6	651 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	GTF2A1L	Q9UNN4	478 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	SHOC2	Q9UQ13	582 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	HPSE	Q9Y251	543 aa		4.61	□□□□□ -1.67
PARN-208	ENST00000563155	MTO1	Q9Y2Z2	717 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	REXO2	Q9Y3B8	237 aa	Known RBP	4.61	□□□□□ -1.67
PARN-208	ENST00000563155	GOLGA6L6	A8MZA4	724 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	CCP110	O43303	1012 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	WDHD1	O75717	1129 aa	Predicted RBP	4.6	□□□□□ -1.67
PARN-208	ENST00000563155	RHOBTB3	O94955	611 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	SCAF4	O95104	1147 aa	Known RBP	4.6	□□□□□ -1.67
PARN-208	ENST00000563155	AGR2	O95994	175 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	HGF	P14210	728 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	EGR1	P18146	543 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	YY1	P25490	414 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	MST1	P26927	711 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	NTSR1	P30989	418 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	DGKE	P52429	567 aa		4.6	□□□□□ -1.67
PARN-208	ENST00000563155	PRKAG1	P54619	331 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms