RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GCNT1Q02742 428 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 CUL2Q13617 745 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 MAN2A1Q16706 1144 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 TPD52L1Q16890 204 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-204ENST00000563130 TMEM259Q4ZIN3 620 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 TCP11X2Q5H9J9 407 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 IQCEQ6IPM2 695 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 ACOT1Q86TX2 421 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 RNF135Q8IUD6 432 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 FUKQ8N0W3 1084 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 ELMOD1Q8N336 334 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 TDRD5Q8NAT2 981 aaKnown RBP6.58□□□□□ -1.36
CNOT1-204ENST00000563130 ITFG1Q8TB96 612 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 FGF13Q92913 245 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 MYRFLQ96LU7 910 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 BPIFA3Q9BQP9 254 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 CORO1BQ9BR76 489 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 TUBGCP2Q9BSJ2 902 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 NT5C1AQ9BXI3 368 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 B3GNT5Q9BYG0 378 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 ELOVL4Q9GZR5 314 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 ASAH2Q9NR71 780 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 CISHQ9NSE2 258 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-204ENST00000563130 CDH7Q9ULB5 785 aa6.58□□□□□ -1.36
CNOT1-204ENST00000563130 LRRC10BA6NIK2 292 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 KCNJ18B7U540 433 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TNFRSF10AO00220 468 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF197O14709 1029 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 AP1G2O75843 785 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 NOL4O94818 638 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 LETM1O95202 739 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF18P17022 549 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CD58P19256 250 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ACO1P21399 889 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 PTPRDP23468 1912 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SP100P23497 879 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 BDNFP23560 247 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TBXAS1P24557 533 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CTHP32929 405 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CACNA2D1P54289 1103 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 RAD23BP54727 409 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 MYL5Q02045 173 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CYP27A1Q02318 531 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ORC1Q13415 861 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 KCNJ12Q14500 433 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 DDR2Q16832 855 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SKOR2Q2VWA4 1001 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 HSP90AA4PQ58FG1 418 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CYP4A22Q5TCH4 519 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 PHLDB3Q6NSJ2 640 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 DPY19L2P1Q6NXN4 242 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TRIM65Q6PJ69 517 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 PDZD4Q76G19 769 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 GET4Q7L5D6 327 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TMEM150AQ86TG1 271 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ITIH5Q86UX2 942 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 NPAS3Q8IXF0 933 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 C12orf29Q8N999 325 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ACSF2Q96CM8 615 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TCEAL4Q96EI5 215 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TRMT2BQ96GJ1 504 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SPATA17Q96L03 361 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 C8orf48Q96LL4 319 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 NT5C1BQ96P26 610 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 HNRNPABQ99729 332 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF518BQ9C0D4 1074 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 NDST4Q9H3R1 872 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CSNK1G1Q9HCP0 422 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 FANCLQ9NW38 375 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 GDE1Q9NZC3 331 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 MRPS23Q9Y3D9 190 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SYCE3A1L190 88 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ANHXE9PGG2 379 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 F8VP50 259 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CLDN5O00501 218 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CLSTN1O94985 981 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 F11P03951 625 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CSH1P0DML2 217 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CSH2P0DML3 217 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SLC9A1P19634 815 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 MTIF2P46199 727 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 LRMPQ12912 555 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 VEPH1Q14D04 833 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ANO6Q4KMQ2 910 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SDHAF4Q5VUM1 108 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 APTXQ7Z2E3 356 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 FAM35AQ86V20 835 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CREBRFQ8IUR6 639 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ARHGEF19Q8IW93 802 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SLC4A11Q8NBS3 891 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 ZMIZ2Q8NF64 920 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 SLC2A14Q8TDB8 520 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 GPR152Q8TDT2 470 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 KAT5Q92993 513 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms