RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 SNX25Q9H3E2 840 aa11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 PARD6AQ9NPB6 346 aa11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 THG1LQ9NWX6 298 aaKnown RBP11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 UXTQ9UBK9 157 aaPredicted RBP11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 HMGXB4Q9UGU5 601 aa11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 CEP250Q9BV73 2442 aa11.79□□□□□ -0.52
KLHDC4-209ENST00000562872 TRAV19A0A0A6YYK7 116 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 A8MXQ7 604 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 NR3C1P04150 777 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 PXNP49023 591 aaPredicted RBP11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 CLDN10P78369 228 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 BIRC3Q13489 604 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 TRPC3Q13507 836 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 EML3Q32P44 896 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 DGKKQ5KSL6 1271 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 SPOPLQ6IQ16 392 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 DENND5BQ6ZUT9 1274 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 PAQR9Q6ZVX9 377 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 SLC9A9Q8IVB4 645 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 B3GALNT2Q8NCR0 500 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 TTLL2Q9BWV7 592 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 RNF38Q9H0F5 515 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 LINC00597Q9H2U6 94 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 NCDNQ9UBB6 729 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 ZMYM5Q9UJ78 669 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 MAPK8IP1Q9UQF2 711 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
KLHDC4-209ENST00000562872 FAM237AA0A1B0GTK4 181 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 ZNF840PA6NDX5 716 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 TRDMT1O14717 391 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 PHACTR2O75167 634 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 PAPSS2O95340 614 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 USP17L7P0C7H9 530 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 HDCP19113 662 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 GJA4P35212 333 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 SYKP43405 635 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 PGFP49763 221 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 GALK1P51570 392 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 KRT85P78386 507 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 IFRD2Q12894 506 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 NCOA4Q13772 614 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 KCNB1Q14721 858 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 MAPRE1Q15691 268 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 GAB4Q2WGN9 574 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 CC2D1AQ6P1N0 951 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 C1orf228Q6PIY5 440 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 FSIP1Q8NA03 581 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 SCAMP5Q8TAC9 235 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 OSCP1Q8WVF1 389 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 SYAP1Q96A49 352 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 KCNK16Q96T55 309 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 FAM126AQ9BYI3 521 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 ECT2Q9H8V3 914 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 VRTNQ9H8Y1 702 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 DUS2Q9NX74 493 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 SMPD4Q9NXE4 827 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 CGNQ9P2M7 1197 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 ARHGAP26Q9UNA1 814 aa11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 ZNF638Q14966 1978 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-209ENST00000562872 HELZP42694 1942 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 SOBPA7XYQ1 873 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 LEFTY2O00292 366 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 TRIM66O15016 1216 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 RNF40O75150 1001 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 TRIM49P0CI25 452 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 TRIM49CP0CI26 452 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 CCDC130P13994 396 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 ANXA13P27216 316 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 ATICP31939 592 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 NOP14P78316 857 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 MESP2Q0VG99 397 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 DPYDQ12882 1025 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 TAF10Q12962 218 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 PDGFRLQ15198 375 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 ZACNQ401N2 412 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 CEP135Q66GS9 1140 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 PRR23BQ6ZRT6 265 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 SV2AQ7L0J3 742 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 SFTPA1Q8IWL2 248 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 GOLGA5Q8TBA6 731 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 TWNKQ96RR1 684 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 APOBEC3GQ9HC16 384 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
KLHDC4-209ENST00000562872 MED19A0JLT2 244 aaPredicted RBP11.75□□□□□ -0.53
KLHDC4-209ENST00000562872 PDXKO00764 312 aa11.75□□□□□ -0.53
KLHDC4-209ENST00000562872 AKAP3O75969 853 aa11.75□□□□□ -0.53
KLHDC4-209ENST00000562872 BEST1O76090 585 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms