RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 HMGA1P17096 107 aaKnown RBP17.31■□□□□ 0.36
USB1-206ENST00000562534 GNA15P30679 374 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 SOX5P35711 763 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 KCNQ1P51787 676 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 CACNA2D1P54289 1103 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 BCAT1P54687 386 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 PLCB2Q00722 1185 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 CLEC20AQ6ZU45 233 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 HS6ST3Q8IZP7 471 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 MYO6Q9UM54 1294 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 MAGED2Q9UNF1 606 aaPredicted RBP17.31■□□□□ 0.36
USB1-206ENST00000562534 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
USB1-206ENST00000562534 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
USB1-206ENST00000562534 NR2E1Q9Y466 385 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 ZFP37Q9Y6Q3 630 aaPredicted RBP17.31■□□□□ 0.36
USB1-206ENST00000562534 CLUHO75153 1309 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 THAP12O43422 761 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 MYL4P12829 197 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 BRD2P25440 801 aaKnown RBP17.3■□□□□ 0.36
USB1-206ENST00000562534 KRT9P35527 623 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 PBX1P40424 430 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 PPP3CCP48454 512 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 JAM2P57087 298 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 NTHL1P78549 312 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 BST2Q10589 180 aaKnown RBP17.3■□□□□ 0.36
USB1-206ENST00000562534 MEA1Q16626 185 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 GOLGA7BQ2TAP0 167 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 SARM1Q6SZW1 724 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 OTOP3Q7RTS5 596 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 ZMIZ2Q8NF64 920 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 FEZF2Q8TBJ5 459 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 ACSF2Q96CM8 615 aaPredicted RBP17.3■□□□□ 0.36
USB1-206ENST00000562534 FBXO44Q9H4M3 255 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 TMEM30AQ9NV96 361 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 IL37Q9NZH6 218 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 CDH22Q9UJ99 828 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.3■□□□□ 0.36
USB1-206ENST00000562534 BRWD1Q9NSI6 2320 aa17.3■□□□□ 0.36
USB1-206ENST00000562534 TNFRSF10BO14763 440 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 SETSIPP0DME0 302 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 IL9P15248 144 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 YWHAQP27348 245 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 CDC25CP30307 473 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 PKDCCQ504Y2 493 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 PRSS36Q5K4E3 855 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 SLC47A2Q86VL8 602 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 TTC30AQ86WT1 665 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 ZNF397Q8NF99 534 aaPredicted RBP17.29■□□□□ 0.36
USB1-206ENST00000562534 UBA3Q8TBC4 463 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 ZSWIM1Q9BR11 485 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 TTLL2Q9BWV7 592 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 TRIM5Q9C035 493 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 ZMYM5Q9UJ78 669 aa17.29■□□□□ 0.36
USB1-206ENST00000562534 REV3LO60673 3130 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 SOBPA7XYQ1 873 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 HHLA1C9JL84 531 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 XPO1O14980 1071 aaKnown RBP17.28■□□□□ 0.36
USB1-206ENST00000562534 GFPT2O94808 682 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 SLC34A2O95436 690 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 F11P03951 625 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 CYP11B1P15538 503 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 GABRR2P28476 465 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 PDE4CQ08493 712 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 PTPN21Q16825 1174 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 TJAP1Q5JTD0 557 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 PIGZQ86VD9 579 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 ZNF677Q86XU0 584 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 ADHFE1Q8IWW8 467 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 SLC35F5Q8WV83 523 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 KCTD13Q8WZ19 329 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 SLITRK1Q96PX8 696 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 NUCKS1Q9H1E3 243 aaKnown RBP17.28■□□□□ 0.36
USB1-206ENST00000562534 LHX5Q9H2C1 402 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
USB1-206ENST00000562534 ACP6Q9NPH0 428 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 GDE1Q9NZC3 331 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 CDH7Q9ULB5 785 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 PCDHGC3Q9UN70 934 aa17.28■□□□□ 0.36
USB1-206ENST00000562534 ITIH6Q6UXX5 1313 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 A0A1W2PQJ5 194 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 M0QYV0 167 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 CALCAP01258 141 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 PNMA6AP0CW24 399 aaPredicted RBP17.27■□□□□ 0.36
USB1-206ENST00000562534 FERP16591 822 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 GBP2P32456 591 aaPredicted RBP17.27■□□□□ 0.36
USB1-206ENST00000562534 CCR2P41597 374 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 PLA2G4AP47712 749 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 PDE6CP51160 858 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 KIF11P52732 1056 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 SLC5A3P53794 718 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 ARHGAP15Q53QZ3 475 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 GAREM2Q75VX8 874 aa17.27■□□□□ 0.36
USB1-206ENST00000562534 PDZD8Q8NEN9 1154 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms