RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 VCPP55072 806 aaKnown RBP17.4■□□□□ 0.38
PKD1-226ENST00000562425 GCNT1Q02742 428 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
PKD1-226ENST00000562425 ZNF394Q53GI3 561 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 FAM78AQ5JUQ0 283 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 GBP6Q6ZN66 633 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 PAQR9Q6ZVX9 377 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 NUP93Q8N1F7 819 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 ZSCAN18Q8TBC5 510 aaPredicted RBP17.4■□□□□ 0.38
PKD1-226ENST00000562425 ELSPBP1Q96BH3 223 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 ARID3AQ99856 593 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 TUBGCP2Q9BSJ2 902 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 INTS2Q9H0H0 1204 aaKnown RBP17.4■□□□□ 0.38
PKD1-226ENST00000562425 TRPV4Q9HBA0 871 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 KRT82Q9NSB4 513 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 GCNT4Q9P109 453 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 KIAA1257Q9ULG3 409 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 DUSP12Q9UNI6 340 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 DOCK8Q8NF50 2099 aa17.4■□□□□ 0.38
PKD1-226ENST00000562425 KCNJ18B7U540 433 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 GFRA3O60609 400 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 TPM2P07951 284 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 ADORA2BP29275 332 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 RAD23BP54727 409 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 TYRO3Q06418 890 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 VWA3BQ502W6 1294 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 SLC4A11Q8NBS3 891 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 ANKRD20A12PQ8NF67 263 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 JAKMIP2Q96AA8 810 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 ZSWIM3Q96MP5 696 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 TTLL2Q9BWV7 592 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 NDST4Q9H3R1 872 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 SAMSN1Q9NSI8 373 aaKnown RBP17.39■□□□□ 0.37
PKD1-226ENST00000562425 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 SPTBN4Q9H254 2564 aa17.39■□□□□ 0.37
PKD1-226ENST00000562425 DPYSL4O14531 572 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 SRFP11831 508 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 WEE1P30291 646 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 SLC8A3P57103 927 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 CYP4F8P98187 520 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 MYL5Q02045 173 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 EXOC3L4Q17RC7 722 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 SGO2Q562F6 1265 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 HSP90AA4PQ58FG1 418 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 TANGO2Q6ICL3 276 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 C11orf57Q6ZUT1 292 aaPredicted RBP17.38■□□□□ 0.37
PKD1-226ENST00000562425 ENOSF1Q7L5Y1 443 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 MON1AQ86VX9 555 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 STKLD1Q8NE28 680 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 ATOH1Q92858 354 aaPredicted RBP17.38■□□□□ 0.37
PKD1-226ENST00000562425 KCNK16Q96T55 309 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 KXD1Q9BQD3 176 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 CSNK1G1Q9HCP0 422 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 TRPM5Q9NZQ8 1165 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 PCDHB4Q9Y5E5 795 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 VPS13AQ96RL7 3174 aa17.38■□□□□ 0.37
PKD1-226ENST00000562425 PROB1E7EW31 1015 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 PES1O00541 588 aaKnown RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 GALR2O43603 387 aaPredicted RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 PAEPP09466 180 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 YWHAQP27348 245 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 AVPR1AP37288 418 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 PDE6CP51160 858 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 CACNA2D1P54289 1103 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 MFAP3P55082 362 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 MAP3K7CLP57077 242 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 PPP1R26Q5T8A7 1209 aaPredicted RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 ARHGAP17Q68EM7 881 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 POTEHQ6S545 545 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 RRAGAQ7L523 313 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 TMEM150AQ86TG1 271 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 ARID3BQ8IVW6 561 aaPredicted RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 CMTM8Q8IZV2 173 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 PDZD8Q8NEN9 1154 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 ST13P5Q8NFI4 369 aaPredicted RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 DEPDC1BQ8WUY9 529 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 SMOQ99835 787 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 CRACR2AQ9BSW2 395 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 RPP25Q9BUL9 199 aaKnown RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 SLC46A2Q9BY10 475 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 UBE2TQ9NPD8 197 aaPredicted RBP17.37■□□□□ 0.37
PKD1-226ENST00000562425 SLC2A4RGQ9NR83 387 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 FBXL21Q9UKT6 434 aa17.37■□□□□ 0.37
PKD1-226ENST00000562425 NRG2O14511 850 aaPredicted RBP17.36■□□□□ 0.37
PKD1-226ENST00000562425 VDRP11473 427 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 CD19P15391 556 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 NPR3P17342 541 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 PFKLP17858 780 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 PSMC3P17980 439 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 USP46P62068 366 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 PFKPQ01813 784 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 STXBP5Q5T5C0 1151 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 CDKAL1Q5VV42 579 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 SMYD5Q6GMV2 418 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 PHLDB3Q6NSJ2 640 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 TRIM65Q6PJ69 517 aa17.36■□□□□ 0.37
PKD1-226ENST00000562425 TMEM270Q6UE05 265 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms