RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 PCDHGA5Q9Y5G8 931 aa13.4□□□□□ -0.26
HERC2-202ENST00000562136 K7ELQ4 463 aaPredicted RBP13.39□□□□□ -0.27
HERC2-202ENST00000562136 CUTAO60888 179 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 RPP40O75818 363 aaKnown RBP13.39□□□□□ -0.27
HERC2-202ENST00000562136 CHRM1P11229 460 aaPredicted RBP13.39□□□□□ -0.27
HERC2-202ENST00000562136 HDCP19113 662 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 PDE6CP51160 858 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 USP46P62068 366 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 CLDN10P78369 228 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 SLC7A9P82251 487 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 STK38Q15208 465 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 FAM26FQ5R3K3 315 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 KBTBD6Q86V97 674 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
HERC2-202ENST00000562136 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 CD101Q93033 1021 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 PCED1BQ96HM7 432 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 CGRRF1Q99675 332 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 XYLT2Q9H1B5 865 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 VRTNQ9H8Y1 702 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 TMEM30AQ9NV96 361 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 CGNQ9P2M7 1197 aaKnown RBP13.39□□□□□ -0.27
HERC2-202ENST00000562136 SLC8A2Q9UPR5 921 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
HERC2-202ENST00000562136 THADAQ6YHU6 1953 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 A0A0A0MRY4 1105 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 ZNF840PA6NDX5 716 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 TRIM66O15016 1216 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 GDF9O60383 454 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 CKMP06732 381 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 BDNFP23560 247 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 OPRD1P41143 372 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 PSMC1P62191 440 aaKnown RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 UNC13DQ70J99 1090 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 CEP68Q76N32 757 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 SCN4BQ8IWT1 228 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 XXYLT1Q8NBI6 393 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 ZNF516Q92618 1163 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 DUSP9Q99956 384 aaKnown RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 MRPL45Q9BRJ2 306 aaKnown RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 LINC00597Q9H2U6 94 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 EHD2Q9NZN4 543 aa13.38□□□□□ -0.27
HERC2-202ENST00000562136 TNRC6BQ9UPQ9 1833 aaKnown RBP13.38□□□□□ -0.27
HERC2-202ENST00000562136 OAS1P00973 400 aaKnown RBP13.37□□□□□ -0.27
HERC2-202ENST00000562136 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 ATICP31939 592 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 IFNAR2P48551 515 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 PXNP49023 591 aaPredicted RBP13.37□□□□□ -0.27
HERC2-202ENST00000562136 ASIC1P78348 528 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 NR1H3Q13133 447 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 KCNB1Q14721 858 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 PLK5Q496M5 336 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 ADGRG2Q8IZP9 1017 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 RPLP0P6Q8NHW5 317 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 DDX1Q92499 740 aaKnown RBP13.37□□□□□ -0.27
HERC2-202ENST00000562136 SNX21Q969T3 373 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 ACDQ96AP0 544 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 RNF38Q9H0F5 515 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 ARRDC1-AS1Q9H2J1 176 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 TRPC7Q9HCX4 862 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
HERC2-202ENST00000562136 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
HERC2-202ENST00000562136 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
HERC2-202ENST00000562136 MYH10P35580 1976 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 PI4KAP42356 2102 aa13.37□□□□□ -0.27
HERC2-202ENST00000562136 F8VP50 259 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 K7EQS6 105 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 LEFTY2O00292 366 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 AXIN1O15169 862 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 NFATC1O95644 943 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 APBB3O95704 486 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 PTPN1P18031 435 aaKnown RBP13.36□□□□□ -0.27
HERC2-202ENST00000562136 GRIK1P39086 918 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 CACNA2D1P54289 1103 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 PSMD2Q13200 908 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 DMC1Q14565 340 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 PPM1JQ5JR12 505 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 SNX30Q5VWJ9 437 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 RASSF3Q86WH2 238 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 USP33Q8TEY7 942 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 NOC3LQ8WTT2 800 aaKnown RBP13.36□□□□□ -0.27
HERC2-202ENST00000562136 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 DHX58Q96C10 678 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 CNTNAP3BQ96NU0 1288 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 CNTNAP3Q9BZ76 1288 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 ELOVL4Q9GZR5 314 aa13.36□□□□□ -0.27
HERC2-202ENST00000562136 DUSP15Q9H1R2 295 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms