RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PTPRDP23468 1912 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 PTPRZ1P23471 2315 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 OTOL1A6NHN0 477 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 SPECC1L-ADORA2AF8WAN1 911 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 MAN2B1O00754 1011 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 TRIM66O15016 1216 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 AP1G2O75843 785 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 BEST1O76090 585 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 STAU1O95793 577 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 ASS1P00966 412 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 HDCP19113 662 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 MAP3K7CLP57077 242 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 FCHO2Q0JRZ9 810 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 TAF10Q12962 218 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 MTAPQ13126 283 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 FZD5Q13467 585 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 CAMK4Q16566 473 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 VSTM1Q6UX27 236 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 Q6ZS52 159 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 SCAMP5Q8TAC9 235 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 SLC2A14Q8TDB8 520 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 SH3RF2Q8TEC5 729 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 TATDN2Q93075 761 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 E2F7Q96AV8 911 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 ELOVL4Q9GZR5 314 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 HPS4Q9NQG7 708 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 TDP1Q9NUW8 608 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 POLR3BQ9NW08 1133 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 THG1LQ9NWX6 298 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 TRPM5Q9NZQ8 1165 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 CHORDC1Q9UHD1 332 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 CTNND2Q9UQB3 1225 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 MRPS17Q9Y2R5 130 aaKnown RBP10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 GREB1Q4ZG55 1949 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 ANAPC1Q9H1A4 1944 aa10.07□□□□□ -0.8
NSMCE1-203ENST00000562039 USP17L7P0C7H9 530 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 IRF1P10914 325 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 P4HA1P13674 534 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 DDX6P26196 483 aaKnown RBP eCLIP10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 CTHP32929 405 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 IFNAR2P48551 515 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 MXI1P50539 228 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 NUBP1P53384 320 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 GAS6Q14393 721 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 MTF1Q14872 753 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 CBWD6Q4V339 395 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 CBWD3Q5JTY5 395 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 CBWD5Q5RIA9 395 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 CC2D1AQ6P1N0 951 aaPredicted RBP10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 FUKQ8N0W3 1084 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 ADSSL1Q8N142 457 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 ZNF687Q8N1G0 1237 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 FBXO32Q969P5 355 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 TRMT2BQ96GJ1 504 aaKnown RBP10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 SPATA17Q96L03 361 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 C8orf48Q96LL4 319 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 MYRFLQ96LU7 910 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 GSDMAQ96QA5 445 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 SMOQ99835 787 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 ARID3AQ99856 593 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 IMPG2Q9BZV3 1241 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 RNF38Q9H0F5 515 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 LINC00597Q9H2U6 94 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 FBRSL1Q9HCM7 1045 aaKnown RBP10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 C2orf42Q9NWW7 574 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 GMIPQ9P107 970 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 GCNT4Q9P109 453 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 ATP8B3O60423 1300 aa10.06□□□□□ -0.8
NSMCE1-203ENST00000562039 ZNF840PA6NDX5 716 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 PRR23AA6NEV1 266 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 ANTXRLA6NF34 631 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 LEFTY2O00292 366 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 IKBKBO14920 756 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NCAM2O15394 837 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 MBL2P11226 248 aaPredicted RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 CHRNB1P11230 501 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 BMP6P22004 513 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 YWHAQP27348 245 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NBL1P41271 181 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 PGFP49763 221 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 SLC5A3P53794 718 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 ZXDBP98169 803 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 SATB1Q01826 763 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 DMWDQ09019 674 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 RUNX3Q13761 415 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 ZNF77Q15935 545 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 NFIL3Q16649 462 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 EDRF1Q3B7T1 1238 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 ITPRIPL2Q3MIP1 535 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 CCDC40Q4G0X9 1142 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 KRT39Q6A163 491 aa10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 HEATR6Q6AI08 1181 aaKnown RBP10.05□□□□□ -0.8
NSMCE1-203ENST00000562039 GPRIN1Q7Z2K8 1008 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms