RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 P4HA1P13674 534 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 EN2P19622 333 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CD52P31358 61 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 MAN1A1P33908 653 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 THPOP40225 353 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 RPL34P49207 117 aaKnown RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 AARSP49588 968 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 DNA2P51530 1060 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 VSNL1P62760 191 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 FAM189BP81408 668 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 OGDHQ02218 1023 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 MYO1EQ12965 1108 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 MESDQ14696 234 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 GPNMBQ14956 572 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 BRD3Q15059 726 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 SIX1Q15475 284 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 PLEKHG6Q3KR16 790 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF618Q5T7W0 954 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 LIN9Q5TKA1 542 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 ARHGAP17Q68EM7 881 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 TWF2Q6IBS0 349 aaKnown RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 AADACL2Q6P093 401 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CC2D1AQ6P1N0 951 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CD300LGQ6UXG3 332 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 RTN4RL1Q86UN2 441 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 UNC93AQ86WB7 457 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 OSTM1Q86WC4 334 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CRYBG2Q8N1P7 616 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 PDCL2Q8N4E4 241 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 FEZF2Q8TBJ5 459 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CAGE1Q8TC20 777 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 HNRNPLLQ8WVV9 542 aaKnown RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 LINC01599Q8WXQ3 324 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 MCRS1Q96EZ8 462 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CPXM1Q96SM3 734 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 RHOXF2Q9BQY4 288 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 LRRC1Q9BTT6 524 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 TRIM6Q9C030 488 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 IRF2BPLQ9H1B7 796 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 TRPV6Q9H1D0 765 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 WNT8AQ9H1J5 351 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 GOLGA2P5Q9HBQ8 144 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 PAK6Q9NQU5 681 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 DMGDHQ9UI17 866 aaKnown RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 KIAA1257Q9ULG3 409 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 ZMIZ1Q9ULJ6 1067 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 L1RE1Q9UN81 338 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 GIT1Q9Y2X7 761 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 NR2E1Q9Y466 385 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 A0A0U1RQF3 1178 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 CCDC66A2RUB6 948 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 CCDC151A5D8V7 595 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM110-MUSTN1A8MSY1 372 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 KPNA7A9QM74 516 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 KBTBD13C9JR72 458 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 M0QZ92 97 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 ARVCFO00192 962 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 PGRMC1O00264 195 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 GABRDO14764 452 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 MED7O43513 233 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 HCRTO43612 131 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 ERBB2P04626 1255 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TUBBP07437 444 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 VSIG8P0DPA2 414 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 GHRP10912 638 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 PYGMP11217 842 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 CKBP12277 381 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 CD19P15391 556 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 WARSP23381 471 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TNFRSF8P28908 595 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 PNPLA4P41247 253 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 SLC1A1P43005 524 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 PAFAH1B1P43034 410 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 SERPINB4P48594 390 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TAF6P49848 677 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TAS2R40P59535 323 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 LILRA4P59901 499 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 RPL7AP62424 266 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TNNC1P63316 161 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 GLE1Q53GS7 698 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 BEND6Q5SZJ8 279 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TTC30AQ86WT1 665 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 XYLT1Q86Y38 959 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 ARFGAP1Q8N6T3 406 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 NIPA2Q8N8Q9 360 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 C12orf29Q8N999 325 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 C3orf20Q8ND61 904 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 DIS3LQ8TF46 1054 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 STK32AQ8WU08 396 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 RUBCNQ92622 972 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 LPPQ93052 612 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
CAPN3-210ENST00000561817 GAD1Q99259 594 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms