RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 MAB21L3Q8N8X9 362 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 ENOX1Q8TC92 643 aaKnown RBP14.75□□□□□ -0.05
TPM1-230ENST00000561266 TFAP2BQ92481 460 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 SMARCD2Q92925 531 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 TMEM176AQ96HP8 235 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 FAXDC2Q96IV6 333 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
TPM1-230ENST00000561266 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 CYP2S1Q96SQ9 504 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
TPM1-230ENST00000561266 FUCA2Q9BTY2 467 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 TTLL2Q9BWV7 592 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 TRPV4Q9HBA0 871 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 CSNK1G1Q9HCP0 422 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 SIX2Q9NPC8 291 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 CCL26Q9Y258 94 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 NFE2L3Q9Y4A8 694 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 ZNF318Q5VUA4 2279 aa14.75□□□□□ -0.05
TPM1-230ENST00000561266 KMT2EQ8IZD2 1858 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 ZDBF2Q9HCK1 2354 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 C2orf78A6NCI8 922 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 TRIM66O15016 1216 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 ECI2O75521 394 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 CDC25CP30307 473 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 KCNMA1Q12791 1236 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 IFRD2Q12894 506 aaPredicted RBP14.74□□□□□ -0.05
TPM1-230ENST00000561266 CDKAL1Q5VV42 579 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 SASS6Q6UVJ0 657 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 DENND5BQ6ZUT9 1274 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 MTSS1LQ765P7 747 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 UBALD2Q8IYN6 164 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 PPM1KQ8N3J5 372 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 NXPE3Q969Y0 559 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 ELSPBP1Q96BH3 223 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 SMARCD1Q96GM5 515 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 SLITRK6Q9H5Y7 841 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 TASP1Q9H6P5 420 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 ZFP14Q9HCL3 533 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 FANCLQ9NW38 375 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 IL37Q9NZH6 218 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 RAPGEFL1Q9UHV5 662 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
TPM1-230ENST00000561266 SHISA7A6NL88 538 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 HEPACAM2A8MVW5 462 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 KCNJ18B7U540 433 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TULP2O00295 520 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 SRFP11831 508 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 NPR3P17342 541 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 PON1P27169 355 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 ANXA13P27216 316 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 SLC5A3P53794 718 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 ZXDBP98169 803 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TAF10Q12962 218 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 KCNJ12Q14500 433 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 STX1AQ16623 288 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 MAN2A1Q16706 1144 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TCP11X2Q5H9J9 407 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 CT47A1Q5JQC4 288 aaPredicted RBP14.73□□□□□ -0.05
TPM1-230ENST00000561266 TMEM31Q5JXX7 168 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TRIM65Q6PJ69 517 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TTC30AQ86WT1 665 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 NUP93Q8N1F7 819 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 JAKMIP2Q96AA8 810 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TUBGCP2Q9BSJ2 902 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 DMAP1Q9NPF5 467 aaPredicted RBP14.73□□□□□ -0.05
TPM1-230ENST00000561266 ANO10Q9NW15 660 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 TAB2Q9NYJ8 693 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 GCNT4Q9P109 453 aa14.73□□□□□ -0.05
TPM1-230ENST00000561266 ZNF840PA6NDX5 716 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 BECN2A8MW95 431 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 GABBR2O75899 941 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 FGF19O95750 216 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 KLHL40Q2TBA0 621 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 ANO6Q4KMQ2 910 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 VWA3BQ502W6 1294 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 ARHGAP17Q68EM7 881 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 TMEM270Q6UE05 265 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 MON1AQ86VX9 555 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 CMTM8Q8IZV2 173 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 ARL14EPQ8N8R7 260 aaPredicted RBP14.72□□□□□ -0.05
TPM1-230ENST00000561266 USP13Q92995 863 aaPredicted RBP14.72□□□□□ -0.05
TPM1-230ENST00000561266 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 DUSP16Q9BY84 665 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 RNF38Q9H0F5 515 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 NDST4Q9H3R1 872 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 UBE2TQ9NPD8 197 aaPredicted RBP14.72□□□□□ -0.05
TPM1-230ENST00000561266 ACP6Q9NPH0 428 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 SLC2A4RGQ9NR83 387 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 CHORDC1Q9UHD1 332 aaPredicted RBP14.72□□□□□ -0.05
TPM1-230ENST00000561266 CA14Q9ULX7 337 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 PCDHB4Q9Y5E5 795 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 MYOFQ9NZM1 2061 aa14.72□□□□□ -0.05
TPM1-230ENST00000561266 FAM92AA1XBS5 289 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 PRR33A8MZF0 331 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 ARNTLO00327 626 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 FAM200BP0CF97 657 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
TPM1-230ENST00000561266 TBXAS1P24557 533 aaPredicted RBP14.71□□□□□ -0.05
TPM1-230ENST00000561266 YWHAQP27348 245 aa14.71□□□□□ -0.05
TPM1-230ENST00000561266 WEE1P30291 646 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms