RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 ATP5F1P24539 256 aaPredicted RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 CDKN1CP49918 316 aaPredicted RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 LILRA4P59901 499 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 EXOSC9Q06265 439 aaKnown RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 PTPN21Q16825 1174 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 FCRL6Q6DN72 434 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 LAYNQ6UX15 382 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 Q6ZWC4 215 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 PARS2Q7L3T8 475 aaKnown RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 PRR18Q8N4B5 295 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 GLG1Q92896 1179 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 R3HDM4Q96D70 268 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 DAZAP1Q96EP5 407 aaKnown RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 SPC25Q9HBM1 224 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 LMBRD1Q9NUN5 540 aa4.23□□□□□ -1.73
USP8-216ENST00000561206 A1L4Q6 167 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 C4orf47A7E2U8 309 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 USP1O94782 785 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 PDCP20941 246 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 CDK11BP21127 795 aaKnown RBP4.22□□□□□ -1.73
USP8-216ENST00000561206 MAP2K6P52564 334 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 PDE1AP54750 535 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 TPTEP56180 551 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 IQCB1Q15051 598 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 RGS7BPQ6MZT1 257 aaPredicted RBP4.22□□□□□ -1.73
USP8-216ENST00000561206 PIP4P1Q86T03 277 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 FOXP4Q8IVH2 680 aaPredicted RBP4.22□□□□□ -1.73
USP8-216ENST00000561206 THOC3Q96J01 351 aaKnown RBP4.22□□□□□ -1.73
USP8-216ENST00000561206 THAP7Q9BT49 309 aaPredicted RBP4.22□□□□□ -1.73
USP8-216ENST00000561206 SLCO5A1Q9H2Y9 848 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 GABRQQ9UN88 632 aa4.22□□□□□ -1.73
USP8-216ENST00000561206 TNKSO95271 1327 aa4.21□□□□□ -1.73
USP8-216ENST00000561206 POC1B-GALNT4F8VUJ3 575 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 CHRM5P08912 532 aaPredicted RBP4.21□□□□□ -1.74
USP8-216ENST00000561206 VIPR2P41587 438 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 GPSM2P81274 684 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 CERKLQ49MI3 558 aaPredicted RBP4.21□□□□□ -1.74
USP8-216ENST00000561206 FBXL22Q6P050 247 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 MIS18BP1Q6P0N0 1132 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 USP45Q70EL2 814 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 GALNT4Q8N4A0 578 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 ABHD11Q8NFV4 315 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 BRIX1Q8TDN6 353 aaKnown RBP4.21□□□□□ -1.74
USP8-216ENST00000561206 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 PUS7Q96PZ0 661 aaKnown RBP4.21□□□□□ -1.74
USP8-216ENST00000561206 SNX18Q96RF0 628 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 KLHL13Q9P2N7 655 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 PCDHA1Q9Y5I3 950 aa4.21□□□□□ -1.74
USP8-216ENST00000561206 FCHO1O14526 889 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 UNC5CO95185 931 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 PDE8BO95263 885 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 CYP2A6P11509 494 aaPredicted RBP4.2□□□□□ -1.74
USP8-216ENST00000561206 E2F2Q14209 437 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 MTHFD1LQ6UB35 978 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 TERB1Q8NA31 727 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 PCSK9Q8NBP7 692 aaKnown RBP4.2□□□□□ -1.74
USP8-216ENST00000561206 XAGE5Q8WWM1 108 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 PNPOQ9NVS9 261 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 NDRG4Q9ULP0 352 aaKnown RBP4.2□□□□□ -1.74
USP8-216ENST00000561206 PLEKHM1Q9Y4G2 1056 aa4.2□□□□□ -1.74
USP8-216ENST00000561206 UBE2Q2LH0YL09 131 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 GRPP07492 148 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 DLDP09622 509 aaKnown RBP4.19□□□□□ -1.74
USP8-216ENST00000561206 HDCP19113 662 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 RECQLP46063 649 aaPredicted RBP4.19□□□□□ -1.74
USP8-216ENST00000561206 RENBPP51606 427 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 SOX8P57073 446 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 PGS1Q32NB8 556 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 TBC1D25Q3MII6 688 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 C9orf50Q5SZB4 431 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 SLC35A4Q96G79 324 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 MOGAT1Q96PD6 335 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 LENG8Q96PV6 779 aaPredicted RBP4.19□□□□□ -1.74
USP8-216ENST00000561206 FAM118BQ9BPY3 351 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 SCAF8Q9UPN6 1271 aaKnown RBP4.19□□□□□ -1.74
USP8-216ENST00000561206 SHOC2Q9UQ13 582 aa4.19□□□□□ -1.74
USP8-216ENST00000561206 ALG1L2C9J202 215 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 ADAM10O14672 748 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 EXOC3O60645 756 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 CSF1RP07333 972 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 T-ENOLP0DO92 83 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 CCND1P24385 295 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 IL1R2P27930 398 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 PDE6CP51160 858 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 NKX6-1P78426 367 aaPredicted RBP4.18□□□□□ -1.74
USP8-216ENST00000561206 FAM50AQ14320 339 aaKnown RBP4.18□□□□□ -1.74
USP8-216ENST00000561206 PLS1Q14651 629 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 TMEM240Q5SV17 173 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 MEX3CQ5U5Q3 659 aaKnown RBP4.18□□□□□ -1.74
USP8-216ENST00000561206 GFI1BQ5VTD9 330 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 LVRNQ6Q4G3 990 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 ZNF813Q6ZN06 617 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 PRPF38AQ8NAV1 312 aaKnown RBP4.18□□□□□ -1.74
USP8-216ENST00000561206 CIPCQ9C0C6 399 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 CXorf36Q9H7Y0 433 aa4.18□□□□□ -1.74
USP8-216ENST00000561206 CCNL1Q9UK58 526 aaPredicted RBP4.18□□□□□ -1.74
USP8-216ENST00000561206 TCRBV5S1A1TA0A578 114 aa4.17□□□□□ -1.74
USP8-216ENST00000561206 H3BUI4 141 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms