RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 TRPV5Q9NQA5 729 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 KRT82Q9NSB4 513 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 KIAA1549LQ6ZVL6 1849 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 FANCMQ8IYD8 2048 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 GOLGA6L4A6NEF3 574 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 ANTXRLA6NF34 631 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 SPECC1L-ADORA2AF8WAN1 911 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 IKBKBO14920 756 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 SP9P0CG40 484 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 CHRNB1P11230 501 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 AP3M2P53677 418 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 PKN3Q6P5Z2 889 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF852Q6ZMS4 543 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 C1orf210Q8IVY1 113 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 TTC16Q8NEE8 873 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 FAM3CQ92520 227 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 MRPS31Q92665 395 aaKnown RBP13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 WBP2Q969T9 261 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 FAM83CQ9BQN1 747 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 TMEM8AQ9HCN3 771 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 OBP2AQ9NY56 170 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 WNT6Q9Y6F9 365 aa13.47□□□□□ -0.25
CHRNA3-208ENST00000561128 PRR23AA6NEV1 266 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 PPP1R3GB7ZBB8 358 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 DPYSL4O14531 572 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 TNFRSF10BO14763 440 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 TDGF1P13385 188 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 CD58P19256 250 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 ADORA2BP29275 332 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 INCA1Q0VD86 236 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 TAF10Q12962 218 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 MTAPQ13126 283 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 TTI2Q6NXR4 508 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 CELF5Q8N6W0 485 aaKnown RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 SLC2A14Q8TDB8 520 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 TATDN2Q93075 761 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 MED15Q96RN5 788 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 OSBPL6Q9BZF3 934 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 FBRSL1Q9HCM7 1045 aaKnown RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 TDP1Q9NUW8 608 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 POLR3BQ9NW08 1133 aaPredicted RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 SPATA6Q9NWH7 488 aaPredicted RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 RMND1Q9NWS8 449 aa13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 HHLA1C9JL84 531 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 TRIM66O15016 1216 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 GFRA3O60609 400 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 CILPO75339 1184 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 AP1G2O75843 785 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 KIF20AO95235 890 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 OLFM2O95897 454 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 OAS1P00973 400 aaKnown RBP13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 CKMP06732 381 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 FAM163BP0C2L3 166 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 KRT13P13646 458 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 AVPR1AP37288 418 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 MXI1P50539 228 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 SLC5A3P53794 718 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 DMWDQ09019 674 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 MORC3Q14149 939 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 MTF1Q14872 753 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 PON2Q15165 354 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 GAB4Q2WGN9 574 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 DCAF17Q5H9S7 520 aaPredicted RBP13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 KLHL10Q6JEL2 608 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 CRYBG2Q8N1P7 616 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 SH3RF2Q8TEC5 729 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 SLC35C1Q96A29 364 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 JAKMIP2Q96AA8 810 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 E2F7Q96AV8 911 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 MED10Q9BTT4 135 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 CHRDQ9H2X0 955 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 PRMT8Q9NR22 394 aaPredicted RBP13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 GMIPQ9P107 970 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 UXTQ9UBK9 157 aaPredicted RBP13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 CACNA1IQ9P0X4 2223 aa13.45□□□□□ -0.26
CHRNA3-208ENST00000561128 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 SMC2O95347 1197 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 RPL13P26373 211 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms